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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107956104   protein piccolo 
 ghi-r.1   107924692   proteoglycan 4 
 ghi-r.1   107923568   proteoglycan 4 
 ghi-r.1   107952979   flocculation protein FLO11 
 ath-u.5   AT2G46630   serine/arginine repetitive matrix protein 
 bra-r.6   103866448   serine/arginine repetitive matrix protein 1 
 bra-r.6   103866290   proline-rich receptor-like protein kinase PERK9 
 bna-r.1   106453237   proline-rich receptor-like protein kinase PERK9 
 bna-r.1   106450488   serine/arginine repetitive matrix protein 1-like 
 bna-r.1   106420763   pollen-specific leucine-rich repeat extensin-like protein 1 
 cit-r.1   102612834   vegetative cell wall protein gp1 
 cit-r.1   127900848   vegetative cell wall protein gp1-like 
 gma-u.5   102670397   putative uncharacterized protein DDB_G0290521 
 gma-u.5   102664793   arp2/3 complex-activating protein rickA 
 ppo-u.5   7497274   extensin 
 ppo-u.5   7492797   vegetative cell wall protein gp1 
 mtr-u.5   11442219   putative uncharacterized protein DDB_G0290521 
 mtr-u.5   11440896   uncharacterized LOC11440896 
 sot-r.1   102599437   vegetative cell wall protein gp1-like 

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Top 50 coexpressed genes to 107956104 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107956104 (ghi-r.1 coexpression data)

CoexMap"107956104"


ghiLOC107956104 | Entrez gene ID : 107956104    
Species ghi ath bra bna cit gma ppo mtr sot cre vvi nta hvu tae bdi osa zma sly sbi
Paralog 4 1 2 3 2 2 2 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016747336.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  mito 3  (predict for XP_016747336.2)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_016747336.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107956104
ghi-r.1
for
107924692
ghi-r.1
for
107923568
ghi-r.1
for
107952979
ath-u.5
for
AT2G46630
bra-r.6
for
103866448
bra-r.6
for
103866290
bna-r.1
for
106453237
bna-r.1
for
106450488
bna-r.1
for
106420763
cit-r.1
for
102612834
cit-r.1
for
127900848
gma-u.5
for
102670397
gma-u.5
for
102664793
ppo-u.5
for
7497274
ppo-u.5
for
7492797
mtr-u.5
for
11442219
mtr-u.5
for
11440896
sot-r.1
for
102599437


Ortholog ID: 6446
Species ghi ghi ghi ath bra bra bna cit cit gma vvi ppo ppo mtr mtr sot
Symbol LOC107956104 LOC107923568 LOC107952979 AT2G46630 LOC103866448 LOC103866290 LOC106420763 LOC102612834 LOC127900848 LOC102670397 LOC104881879 LOC7497274 LOC7492797 LOC11442219 LOC11440896 LOC102599437
Function* protein piccolo proteoglycan 4 flocculation protein FLO11 serine/arginine repetitive matrix protein serine/arginine repetitive matrix protein 1 proline-rich receptor-like protein kinase PERK9 pollen-specific leucine-rich repeat extensin-like protein 1 vegetative cell wall protein gp1 vegetative cell wall protein gp1-like putative uncharacterized protein DDB_G0290521 vegetative cell wall protein gp1 extensin vegetative cell wall protein gp1 putative uncharacterized protein DDB_G0290521 uncharacterized LOC11440896 vegetative cell wall protein gp1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra04120 Ubiquitin mediated proteolysis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107956104 107923568 107952979 3768746 103866448 103866290 106420763 102612834 127900848 102670397 104881879 7497274 7492797 11442219 11440896 102599437
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