ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT5G07410	Pectin lyase-like superfamily protein
ath-u.5	AT5G07430	Pectin lyase-like superfamily protein
bna-r.1	106419381	probable pectinesterase 49
bna-r.1	106405870	probable pectinesterase 50
cit-r.1	102610921	pectinesterase PPME1-like
gma-u.5	100306177	putative pectinesterase
gma-u.5	100775404	putative pectinesterase 63
gma-u.5	100786427	pectinesterase PPME1
sly-u.5	101244375	pectinesterase 1-like
sly-u.5	101243787	pectinesterase 1-like
nta-r.1	107824774	pectinesterase 1-like
nta-r.1	107784495	pectinesterase 1-like

functional annotation

KEGG

ghi00040 [list] [network] Pentose and glucuronate interconversions (333 genes)

GO BP

GO:0045490 [list] [network] pectin catabolic process	(63 genes)	IEA
GO:0042545 [list] [network] cell wall modification	(164 genes)	IEA

GO CC

GO MF

GO:0030599 [list] [network] pectinesterase activity

(167 genes)

IEA

Protein

XP_016747473.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, nucl_plas 2, chlo 1, mito 1, extr 1, pero 1, cysk 1, chlo_mito 1

(predict for XP_016747473.2)

Subcellular
localization
TargetP

other 7, mito 4

(predict for XP_016747473.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G07410	ath-u.5 for AT5G07430	bna-r.1 for 106419381	bna-r.1 for 106405870	cit-r.1 for 102610921	gma-u.5 for 100306177	gma-u.5 for 100775404	gma-u.5 for 100786427	sly-u.5 for 101244375	sly-u.5 for 101243787	nta-r.1 for 107824774	nta-r.1 for 107784495

Ortholog ID: 1716

Species

ath

bna

cit

gma

sly

nta

Symbol

PPME1

Function^*

Pectin lyase-like superfamily protein

probable pectinesterase 50

pectinesterase PPME1-like

putative pectinesterase

pectinesterase PPME1

pectinesterase 1-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	9
ath00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	10
ath00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	6
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2
sly00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	9
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	11

Expression

Expression pattern

Entrez Gene ID^*

830632

843331

106379138

106443037

102610921

100306177

100813174

101244375

101243787

107824774

107784495


Species	ath	bna	cit	gma	sly	nta	sot	bdi	vvi	osa	tae	ppo	zma	cre	mtr	sbi	bra	ghi	hvu
Paralog	2	2	1	3	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G07410 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G07410 (ath-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G07410 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G07410 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**