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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107957004   protoporphyrinogen oxidase, mitochondrial 
 ghi-r.1   107899705   protoporphyrinogen oxidase 2, chloroplastic/mitochondrial 
 ath-u.5   HEMG2   Flavin containing amine oxidoreductase family 
 bra-r.6   103846503   protoporphyrinogen oxidase 2, chloroplastic/mitochondrial 
 bna-r.1   111201479   protoporphyrinogen oxidase 2, chloroplastic/mitochondrial 
 bna-r.1   106418654   protoporphyrinogen oxidase 2, chloroplastic/mitochondrial-like 
 cit-r.1   102621631   protoporphyrinogen oxidase 2 
 gma-u.5   HEMG   protoporphyrinogen IX oxidase 
 vvi-u.5   100254398   protoporphyrinogen oxidase, mitochondrial 
 ppo-u.5   7456221   protoporphyrinogen oxidase 2 
 mtr-u.5   11437846   protoporphyrinogen oxidase 2 
 sly-u.5   101251358   protoporphyrinogen oxidase-like protein 
 sot-r.1   102587739   protoporphyrinogen oxidase, mitochondrial 
 nta-r.1   107815753   protoporphyrinogen oxidase, mitochondrial 
 nta-r.1   107761284   protoporphyrinogen oxidase, mitochondrial-like 
 osa-u.5   4336237   protoporphyrinogen oxidase, mitochondrial 
 zma-u.5   541866   protoporphyrinogen IX oxidase (mitochondrial)2 
 tae-r.2   123189607   protoporphyrinogen oxidase, mitochondrial 
 tae-r.2   123053728   protoporphyrinogen oxidase, mitochondrial 
 tae-r.2   123045855   protoporphyrinogen oxidase, mitochondrial 
 hvu-r.1   123427083   protoporphyrinogen oxidase, mitochondrial 
 sbi-r.1   8073702   protoporphyrinogen oxidase, mitochondrial 
 bdi-r.1   100846070   protoporphyrinogen oxidase, mitochondrial 

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Top 50 coexpressed genes to 107957004 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107957004 (ghi-r.1 coexpression data)

CoexMap"107957004"


ghiLOC107957004 | Entrez gene ID : 107957004    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00860 [list] [network] Porphyrin metabolism (118 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0006779 [list] [network] porphyrin-containing compound biosynthetic process  (69 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0004729 [list] [network] oxygen-dependent protoporphyrinogen oxidase activity  (4 genes)  IEA  
Protein XP_016747917.2 [sequence] [blastp]
XP_016747918.2 [sequence] [blastp]
XP_016747921.2 [sequence] [blastp]
XP_040968492.1 [sequence] [blastp]
XP_040968493.1 [sequence] [blastp]
XP_040968494.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 1,  nucl 1,  mito 1,  E.R. 1  (predict for XP_016747917.2)
chlo 6,  vacu 1,  nucl 1,  mito 1,  E.R. 1  (predict for XP_016747918.2)
chlo 6,  nucl 1,  vacu 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016747921.2)
chlo 6,  vacu 1,  nucl 1,  mito 1,  E.R. 1  (predict for XP_040968492.1)
chlo 6,  nucl 1,  vacu 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040968493.1)
chlo 6,  nucl 1,  vacu 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040968494.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_016747917.2)
other 7,  chlo 3  (predict for XP_016747918.2)
other 7,  chlo 3  (predict for XP_016747921.2)
other 7,  chlo 3  (predict for XP_040968492.1)
other 7,  chlo 3  (predict for XP_040968493.1)
other 7,  chlo 3  (predict for XP_040968494.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107957004
ghi-r.1
for
107899705
ath-u.5
for
HEMG2
bra-r.6
for
103846503
bna-r.1
for
111201479
bna-r.1
for
106418654
cit-r.1
for
102621631
gma-u.5
for
HEMG
vvi-u.5
for
100254398
ppo-u.5
for
7456221
mtr-u.5
for
11437846
sly-u.5
for
101251358
sot-r.1
for
102587739
nta-r.1
for
107815753
nta-r.1
for
107761284
osa-u.5
for
4336237
zma-u.5
for
541866
tae-r.2
for
123189607
tae-r.2
for
123053728
tae-r.2
for
123045855
hvu-r.1
for
123427083
sbi-r.1
for
8073702
bdi-r.1
for
100846070


Ortholog ID: 11407
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107957004 LOC107899705 HEMG2 LOC103846503 LOC111201479 LOC106418654 LOC102621631 HEMG LOC100254398 LOC7456221 LOC11437846 LOC101251358 LOC102587739 LOC107815753 LOC107761284 LOC4336237 LOC541866 LOC123189607 LOC123053728 LOC123045855 LOC123427083 LOC8073702 LOC100846070
Function* protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase 2, chloroplastic/mitochondrial Flavin containing amine oxidoreductase family protoporphyrinogen oxidase 2, chloroplastic/mitochondrial protoporphyrinogen oxidase 2, chloroplastic/mitochondrial protoporphyrinogen oxidase 2, chloroplastic/mitochondrial-like protoporphyrinogen oxidase 2 protoporphyrinogen IX oxidase protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase 2 protoporphyrinogen oxidase 2 protoporphyrinogen oxidase-like protein protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase, mitochondrial-like protoporphyrinogen oxidase, mitochondrial protoporphyrinogen IX oxidase (mitochondrial)2 protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase, mitochondrial protoporphyrinogen oxidase, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna00860 Porphyrin metabolism 5
bna00340 Histidine metabolism 3
bna01230 Biosynthesis of amino acids 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 3
bna00340 Histidine metabolism 3
bna01230 Biosynthesis of amino acids 3
bna00230 Purine metabolism 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00030 Pentose phosphate pathway 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi01240 Biosynthesis of cofactors 4
vvi03010 Ribosome 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00410 beta-Alanine metabolism 3
mtr00240 Pyrimidine metabolism 2
mtr00770 Pantothenate and CoA biosynthesis 2
mtr00220 Arginine biosynthesis 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 2
sot00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00860 Porphyrin metabolism 2
nta00620 Pyruvate metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 3
nta00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma00860 Porphyrin metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 8
tae01200 Carbon metabolism 4
tae00071 Fatty acid degradation 4
tae00350 Tyrosine metabolism 4
tae00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 7
tae01200 Carbon metabolism 6
tae01230 Biosynthesis of amino acids 3
tae03018 RNA degradation 3
tae04820 Cytoskeleton in muscle cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 8
tae01200 Carbon metabolism 4
tae00071 Fatty acid degradation 4
tae00350 Tyrosine metabolism 4
tae00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu03083 Polycomb repressive complex 2
hvu04148 Efferocytosis 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107957004 107899705 831272 103846503 111201479 106418654 102621631 547941 100254398 7456221 11437846 101251358 102587739 107815753 107761284 4336237 541866 123189607 123053728 123045855 123427083 8073702 100846070
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