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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958137   transcription factor SPATULA 
 ath-u.5   SPT   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100793754   transcription factor SPATULA 
 gma-u.5   100785332   transcription factor ALC 
 gma-u.5   100806962   transcription factor SPATULA 
 vvi-u.5   100245665   transcription factor SPATULA 
 vvi-u.5   100245419   transcription factor SPATULA 
 ppo-u.5   7462871   transcription factor SPATULA 
 ppo-u.5   18104866   transcription factor SPATULA 
 mtr-u.5   11414235   transcription factor ALC 
 mtr-u.5   11415523   transcription factor SPATULA 
 sly-u.5   SPT   transcription factor SPATULA 
 sly-u.5   ALC   transcription factor ALC 
 osa-u.5   9269153   transcription factor SPATULA 
 osa-u.5   4340229   transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like 
 zma-u.5   100216625   uncharacterized LOC100216625 
 zma-u.5   100193167   uncharacterized LOC100193167 

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Top 50 coexpressed genes to 107958137 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958137 (ghi-r.1 coexpression data)

CoexMap"107958137"


ghiLOC107958137 | Entrez gene ID : 107958137    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 3 2 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
Protein XP_016749303.1 [sequence] [blastp]
XP_016749304.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016749303.1)
nucl 10  (predict for XP_016749304.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_016749303.1)
chlo 8,  other 4  (predict for XP_016749304.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958137
ath-u.5
for
SPT
gma-u.5
for
100793754
gma-u.5
for
100785332
gma-u.5
for
100806962
vvi-u.5
for
100245665
vvi-u.5
for
100245419
ppo-u.5
for
7462871
ppo-u.5
for
18104866
mtr-u.5
for
11414235
mtr-u.5
for
11415523
sly-u.5
for
SPT
sly-u.5
for
ALC
osa-u.5
for
9269153
osa-u.5
for
4340229
zma-u.5
for
100216625
zma-u.5
for
100193167


Ortholog ID: 2576
Species ghi ghi ath bna cit cit gma gma vvi vvi ppo mtr sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi
Symbol LOC107913239 LOC107905585 SPT LOC106390344 LOC102629932 LOC102617525 LOC100806962 LOC100793754 LOC100245665 LOC100245419 LOC18104866 LOC11414235 SPT LOC102591818 LOC102578586 LOC107787554 LOC107807290 LOC4340229 LOC9269153 LOC100216625 LOC100193167 LOC123146019 LOC123128873 LOC123406162 LOC123407232 LOC8056409
Function* transcription factor ALC transcription factor SPATULA basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor ALC transcription factor ALC-like transcription factor SPATULA transcription factor SPATULA transcription factor SPATULA transcription factor SPATULA transcription factor SPATULA transcription factor SPATULA transcription factor ALC transcription factor SPATULA transcription factor SPATULA-like transcription factor SPATULA uncharacterized LOC107787554 uncharacterized LOC107807290 transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like transcription factor SPATULA uncharacterized LOC100216625 uncharacterized LOC100193167 transcription factor SPATULA transcription factor PIF1 transcription factor APG-like transcription factor PIF3-like transcription factor PIF5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi00051 Fructose and mannose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01230 Biosynthesis of amino acids 3
ath00220 Arginine biosynthesis 2
ath00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
gma04626 Plant-pathogen interaction 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
ppo03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 4
sly01200 Carbon metabolism 4
sly01210 2-Oxocarboxylic acid metabolism 3
sly00760 Nicotinate and nicotinamide metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 5
sot01200 Carbon metabolism 5
sot01210 2-Oxocarboxylic acid metabolism 4
sot01230 Biosynthesis of amino acids 3
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot01240 Biosynthesis of cofactors 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01212 Fatty acid metabolism 3
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta04075 Plant hormone signal transduction 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta00061 Fatty acid biosynthesis 2
nta00280 Valine, leucine and isoleucine degradation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa01240 Biosynthesis of cofactors 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
osa04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04075 Plant hormone signal transduction 3
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae00062 Fatty acid elongation 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
hvu01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913239 107905585 829847 106390344 102629932 102617525 100806962 100793754 100245665 100245419 18104866 11414235 101266791 102591818 102578586 107787554 107807290 4340229 9269153 100216625 100193167 123146019 123128873 123406162 123407232 8056409
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