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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958293   chromatin remodeling protein EBS 
 ath-u.5   EBS   PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein 
 ath-u.5   SHL1   PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein 
 gma-u.5   100800806   chromatin remodeling protein EBS 
 gma-u.5   100800993   chromatin remodeling protein EBS-like 
 gma-u.5   100778353   chromatin remodeling protein EBS 
 vvi-u.5   100252013   chromatin remodeling protein EBS 
 vvi-u.5   100854261   chromatin remodeling protein EBS 
 vvi-u.5   100253455   chromatin remodeling protein EBS 
 ppo-u.5   7484543   chromatin remodeling protein EBS 
 ppo-u.5   7470015   chromatin remodeling protein SHL 
 ppo-u.5   7456354   chromatin remodeling protein SHL 
 mtr-u.5   25487657   chromatin remodeling protein EBS 
 mtr-u.5   25487270   chromatin remodeling protein EBS 
 mtr-u.5   11422794   chromatin remodeling protein SHL 
 sly-u.5   101264075   chromatin remodeling protein EBS 
 sly-u.5   101247139   chromatin remodeling protein EBS-like 
 sly-u.5   101253288   chromatin remodeling protein EBS 
 osa-u.5   4346950   chromatin remodeling protein EBS 
 osa-u.5   4345596   chromatin remodeling protein EBS 
 osa-u.5   4334444   chromatin remodeling protein EBS 
 zma-u.5   100284042   uncharacterized LOC100284042 
 zma-u.5   100286231   uncharacterized LOC100286231 
 zma-u.5   100217096   uncharacterized LOC100217096 

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Top 50 coexpressed genes to 107958293 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958293 (ghi-r.1 coexpression data)

CoexMap"107958293"


ghiLOC107958293 | Entrez gene ID : 107958293    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003682 [list] [network] chromatin binding  (366 genes)  IEA  
Protein XP_016749497.1 [sequence] [blastp]
XP_016749498.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 2  (predict for XP_016749497.1)
cyto 6,  nucl 2,  mito 1,  extr 1  (predict for XP_016749498.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016749497.1)
other 9  (predict for XP_016749498.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958293
ath-u.5
for
EBS
ath-u.5
for
SHL1
gma-u.5
for
100800806
gma-u.5
for
100800993
gma-u.5
for
100778353
vvi-u.5
for
100252013
vvi-u.5
for
100854261
vvi-u.5
for
100253455
ppo-u.5
for
7484543
ppo-u.5
for
7470015
ppo-u.5
for
7456354
mtr-u.5
for
25487657
mtr-u.5
for
25487270
mtr-u.5
for
11422794
sly-u.5
for
101264075
sly-u.5
for
101247139
sly-u.5
for
101253288
osa-u.5
for
4346950
osa-u.5
for
4345596
osa-u.5
for
4334444
zma-u.5
for
100284042
zma-u.5
for
100286231
zma-u.5
for
100217096


Ortholog ID: 993
Species ghi ghi ath bra bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107958293 LOC107913543 SHL1 LOC103835144 LOC103861289 LOC106366983 LOC106437645 LOC102622005 LOC102619768 LOC100787968 LOC100800806 LOC100253455 LOC100252013 LOC7489883 LOC7456354 LOC25487657 LOC11422794 LOC101247139 LOC101253288 LOC102587229 LOC107828284 LOC107759203 LOC4342595 LOC4346950 LOC100217096 LOC100286231 LOC123113738 LOC123121440 LOC123395876 LOC123426108 LOC8075023 LOC8075625 LOC100845315 LOC100823715 CHLRE_16g675246v5
Function* chromatin remodeling protein EBS chromatin remodeling protein SHL PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein chromatin remodeling protein SHL chromatin remodeling protein EBS chromatin remodeling protein EBS-like chromatin remodeling protein EBS chromatin remodeling protein SHL chromatin remodeling protein EBS chromatin remodeling protein SHL chromatin remodeling protein EBS chromatin remodeling protein EBS chromatin remodeling protein EBS chromatin remodeling protein EBS chromatin remodeling protein SHL chromatin remodeling protein EBS chromatin remodeling protein SHL chromatin remodeling protein EBS-like chromatin remodeling protein EBS protein winged eye-like chromatin remodeling protein SHL-like chromatin remodeling protein EBS chromatin remodeling protein EBS chromatin remodeling protein EBS uncharacterized LOC100217096 uncharacterized LOC100286231 chromatin remodeling protein EBS chromatin remodeling protein EBS chromatin remodeling protein EBS-like chromatin remodeling protein EBS-like chromatin remodeling protein EBS chromatin remodeling protein EBS chromatin remodeling protein EBS chromatin remodeling protein EBS uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04144 Endocytosis 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr03018 RNA degradation 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03420 Nucleotide excision repair 4
tae04016 MAPK signaling pathway - plant 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 4
bdi04142 Lysosome 4
bdi04145 Phagosome 4
bdi04130 SNARE interactions in vesicular transport 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 6
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958293 107913543 830065 103835144 103861289 106366983 106437645 102622005 102619768 100787968 100800806 100253455 100252013 7489883 7456354 25487657 11422794 101247139 101253288 102587229 107828284 107759203 4342595 4346950 100217096 100286231 123113738 123121440 123395876 123426108 8075023 8075625 100845315 100823715 5724824
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