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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958511   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 ghi-r.1   107906319   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 ath-u.5   AAE14   acyl-activating enzyme 14 
 bra-r.6   103840383   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 bna-r.1   106367267   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 bna-r.1   106407052   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like 
 cit-r.1   102610951   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 gma-u.5   100809925   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 gma-u.5   100787691   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 vvi-u.5   100250731   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 ppo-u.5   18103524   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 mtr-u.5   11412250   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 sly-u.5   101259906   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 sot-r.1   102599176   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 nta-r.1   107788339   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 nta-r.1   107791485   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 osa-u.5   4344589   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 zma-u.5   100275595   putative AMP-dependent synthetase and ligase superfamily protein 
 tae-r.2   123162101   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 tae-r.2   123150942   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 tae-r.2   123167290   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 hvu-r.1   123411745   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 sbi-r.1   8074076   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 bdi-r.1   100825942   2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 
 cre-r.1   CHLRE_01g030900v5   uncharacterized protein 

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Top 50 coexpressed genes to 107958511 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958511 (ghi-r.1 coexpression data)

CoexMap"107958511"


ghiLOC107958511 | Entrez gene ID : 107958511    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (102 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0006631 [list] [network] fatty acid metabolic process  (451 genes)  IEA  
GO CC
GO MF
GO:0031956 [list] [network] medium-chain fatty acid-CoA ligase activity  (6 genes)  IEA  
Protein XP_016749801.1 [sequence] [blastp]
XP_040969238.1 [sequence] [blastp]
XP_040969239.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  E.R. 1  (predict for XP_016749801.1)
nucl 6,  cyto 2,  chlo 1,  pero 1  (predict for XP_040969238.1)
plas 6,  vacu 2,  golg 1,  E.R._vacu 1  (predict for XP_040969239.1)
Subcellular
localization
TargetP
other 3  (predict for XP_016749801.1)
other 7  (predict for XP_040969238.1)
scret 9,  other 3  (predict for XP_040969239.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958511
ghi-r.1
for
107906319
ath-u.5
for
AAE14
bra-r.6
for
103840383
bna-r.1
for
106367267
bna-r.1
for
106407052
cit-r.1
for
102610951
gma-u.5
for
100809925
gma-u.5
for
100787691
vvi-u.5
for
100250731
ppo-u.5
for
18103524
mtr-u.5
for
11412250
sly-u.5
for
101259906
sot-r.1
for
102599176
nta-r.1
for
107788339
nta-r.1
for
107791485
osa-u.5
for
4344589
zma-u.5
for
100275595
tae-r.2
for
123162101
tae-r.2
for
123150942
tae-r.2
for
123167290
hvu-r.1
for
123411745
sbi-r.1
for
8074076
bdi-r.1
for
100825942
cre-r.1
for
CHLRE_01g030900v5


Ortholog ID: 10493
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107958511 LOC107906319 AAE14 LOC103840383 LOC106367267 LOC106407052 LOC102610951 LOC100809925 LOC100787691 LOC100250731 LOC18103524 LOC11412250 LOC101259906 LOC102599176 LOC107788339 LOC107791485 LOC4344589 LOC100275595 LOC123162101 LOC123150942 LOC123167290 LOC123411745 LOC8074076 LOC100825942 CHLRE_01g030900v5
Function* 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal acyl-activating enzyme 14 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal-like 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal putative AMP-dependent synthetase and ligase superfamily protein 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ghi01240 Biosynthesis of cofactors 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 5
bra01240 Biosynthesis of cofactors 4
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00052 Galactose metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 5
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma00906 Carotenoid biosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ppo01240 Biosynthesis of cofactors 4
ppo00195 Photosynthesis 3
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
sly01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 5
osa00860 Porphyrin metabolism 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 5
zma00196 Photosynthesis - antenna proteins 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 9
tae01240 Biosynthesis of cofactors 9
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 9
tae00860 Porphyrin metabolism 8
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 9
tae00860 Porphyrin metabolism 8
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 7
hvu00710 Carbon fixation by Calvin cycle 7
hvu01200 Carbon metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 4
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 6
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958511 107906319 839932 103840383 106367267 106407052 102610951 100809925 100787691 100250731 18103524 11412250 101259906 102599176 107788339 107791485 4344589 100275595 123162101 123150942 123167290 123411745 8074076 100825942 5715375
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