ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107958702	uncharacterized LOC107958702
ghi-r.1	107939002	uncharacterized LOC107939002
ghi-r.1	107948891	uncharacterized LOC107948891
ghi-r.1	107963247	uncharacterized LOC107963247
ath-u.5	AT1G15760	Sterile alpha motif (SAM) domain-containing protein
ath-u.5	AT1G80520	Sterile alpha motif (SAM) domain-containing protein
bra-r.6	103872362	uncharacterized LOC103872362
bra-r.6	103830441	uncharacterized LOC103830441
bra-r.6	103832478	uncharacterized LOC103832478
bna-r.1	BNAC06G19230D	uncharacterized BNAC06G19230D
bna-r.1	BNAA06G10390D	uncharacterized BNAA06G10390D
cit-r.1	102613496	uncharacterized LOC102613496
gma-u.5	100775936	uncharacterized LOC100775936
gma-u.5	100780479	uncharacterized LOC100780479
gma-u.5	100792385	sterile alpha motif (SAM) domain-containing protein
vvi-u.5	100257847	uncharacterized LOC100257847
vvi-u.5	100251733	uncharacterized LOC100251733
ppo-u.5	7470543	uncharacterized LOC7470543
ppo-u.5	18096678	uncharacterized LOC18096678
ppo-u.5	18099891	uncharacterized LOC18099891
mtr-u.5	11443703	uncharacterized LOC11443703
mtr-u.5	11430703	uncharacterized LOC11430703
mtr-u.5	11434394	uncharacterized LOC11434394
sly-u.5	101257978	uncharacterized LOC101257978
sly-u.5	101263007	uncharacterized LOC101263007
sly-u.5	101267246	uncharacterized LOC101267246
sot-r.1	102602753	uncharacterized LOC102602753
sot-r.1	102584676	uncharacterized LOC102584676
sot-r.1	102578374	uncharacterized LOC102578374
nta-r.1	107808807	uncharacterized LOC107808807
nta-r.1	107765321	uncharacterized LOC107765321
osa-u.5	4341653	uncharacterized LOC4341653
osa-u.5	4337184	uncharacterized LOC4337184
zma-u.5	103645858	Sterile alpha motif (SAM) domain-containing protein
zma-u.5	100273200	Sterile alpha motif (SAM) domain-containing protein
zma-u.5	100276658	uncharacterized LOC100276658
sbi-r.1	8068472	uncharacterized LOC8068472

Top 50 coexpressed genes to 107958702 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107958702 (ghi-r.1 coexpression data)

CoexMap"107958702"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(10797 genes)

IEA

Protein

XP_016750027.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, cysk_nucl 2, cyto_E.R. 2

(predict for XP_016750027.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016750027.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107958702	ghi-r.1 for 107939002	ghi-r.1 for 107948891	ghi-r.1 for 107963247	ath-u.5 for AT1G15760	ath-u.5 for AT1G80520	bra-r.6 for 103872362	bra-r.6 for 103830441	bra-r.6 for 103832478	bna-r.1 for BNAC06G19230D	bna-r.1 for BNAA06G10390D	cit-r.1 for 102613496	gma-u.5 for 100775936	gma-u.5 for 100780479	gma-u.5 for 100792385	vvi-u.5 for 100257847	vvi-u.5 for 100251733	ppo-u.5 for 7470543	ppo-u.5 for 18096678	ppo-u.5 for 18099891	mtr-u.5 for 11443703	mtr-u.5 for 11430703	mtr-u.5 for 11434394	sly-u.5 for 101257978	sly-u.5 for 101263007	sly-u.5 for 101267246	sot-r.1 for 102602753	sot-r.1 for 102584676	sot-r.1 for 102578374	nta-r.1 for 107808807	nta-r.1 for 107765321	osa-u.5 for 4341653	osa-u.5 for 4337184	zma-u.5 for 103645858	zma-u.5 for 100273200	zma-u.5 for 100276658	sbi-r.1 for 8068472

Ortholog

Ortholog ID: 1819

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

sbi

Symbol

Function^*

uncharacterized LOC107948891

uncharacterized LOC107897924

Sterile alpha motif (SAM) domain-containing protein

uncharacterized LOC103872362

uncharacterized LOC103830441

uncharacterized LOC103832478

uncharacterized BNAC06G19230D

uncharacterized LOC106356894

uncharacterized LOC102613496

uncharacterized LOC100775936

uncharacterized LOC100805121

uncharacterized LOC102660142

uncharacterized LOC100257847

uncharacterized LOC100251733

uncharacterized LOC7470543

uncharacterized LOC18096678

uncharacterized LOC18099891

uncharacterized LOC11430703

uncharacterized LOC11434394

uncharacterized LOC25488332

uncharacterized LOC101263007

uncharacterized LOC101267246

uncharacterized LOC101261902

uncharacterized LOC102602753

uncharacterized LOC102584676

uncharacterized LOC107059558

uncharacterized LOC107808807

uncharacterized LOC107765321

uncharacterized LOC107831885

uncharacterized LOC4341653

uncharacterized LOC4337184

Sterile alpha motif (SAM) domain-containing protein

uncharacterized LOC100276658

uncharacterized LOC8068472

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	4
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00380	Tryptophan metabolism	3
bra00966	Glucosinolate biosynthesis	3
bra01210	2-Oxocarboxylic acid metabolism	3
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2
gma00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	3
vvi01200	Carbon metabolism	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	5
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01240	Biosynthesis of cofactors	3
ppo04075	Plant hormone signal transduction	2
ppo00250	Alanine, aspartate and glutamate metabolism	2
ppo00760	Nicotinate and nicotinamide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00040	Pentose and glucuronate interconversions	3
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00062	Fatty acid elongation	3
sot04626	Plant-pathogen interaction	3
sot00073	Cutin, suberine and wax biosynthesis	3
sot00564	Glycerophospholipid metabolism	2
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	3
nta00270	Cysteine and methionine metabolism	3
nta00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	3

Expression

Expression pattern

Entrez Gene ID^*

107948891

107897924

838145

844391

103872362

103830441

103832478

106404727

106356894

102613496

100775936

100805121

102660142

100257847

100251733

7470543

18096678

18099891

11430703

11434394

25488332

101263007

101267246

101261902

102602753

102584676

107059558

107808807

107765321

107831885

4341653

4337184

103645858

100273200

100276658

8068472

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	sbi	hvu	tae	cre	bdi
Paralog	4	2	3	2	1	3	2	3	3	3	3	2	2	3	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107958702 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107958702 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**