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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958985   3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 
 ath-u.5   AT3G60510   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-u.5   AT4G31810   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 gma-u.5   100808892   enoyl-CoA hydratase-like 
 gma-u.5   100801676   3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 
 gma-u.5   100790810   3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 
 vvi-u.5   100254599   3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 
 vvi-u.5   100257773   small ribosomal subunit protein mS47 
 vvi-u.5   100254744   3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 
 ppo-u.5   7458419   3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 
 ppo-u.5   18105158   3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 
 mtr-u.5   11423313   3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 
 mtr-u.5   11427294   3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 
 sly-u.5   101265771   3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 
 sly-u.5   101248347   small ribosomal subunit protein mS47 
 osa-u.5   4349332   3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 
 zma-u.5   100382650   uncharacterized LOC100382650 

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Top 50 coexpressed genes to 107958985 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958985 (ghi-r.1 coexpression data)

CoexMap"107958985"


ghiLOC107958985 | Entrez gene ID : 107958985    
Species ghi ath gma vvi ppo mtr sly osa zma tae bra bdi sbi nta cit cre hvu sot bna
Paralog 1 2 3 3 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00280 [list] [network] Valine, leucine and isoleucine degradation (115 genes)
ghi00410 [list] [network] beta-Alanine metabolism (108 genes)
ghi00640 [list] [network] Propanoate metabolism (106 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
GO BP
GO:0006574 [list] [network] L-valine catabolic process  (22 genes)  IEA  
GO CC
GO MF
GO:0003860 [list] [network] 3-hydroxyisobutyryl-CoA hydrolase activity  (14 genes)  IEA  
Protein XP_040968924.1 [sequence] [blastp]
XP_040968925.1 [sequence] [blastp]
XP_040968926.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  cyto_mito 3  (predict for XP_040968924.1)
chlo 3,  mito 3,  chlo_mito 3,  plas 1,  vacu 1,  cyto_mito 1  (predict for XP_040968925.1)
cyto 4,  nucl 4,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for XP_040968926.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_040968924.1)
mito 5,  scret 3  (predict for XP_040968925.1)
other 9  (predict for XP_040968926.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958985

.
ath-u.5
for
AT3G60510

.
ath-u.5
for
AT4G31810

.
gma-u.5
for
100808892

.
gma-u.5
for
100801676

.
gma-u.5
for
100790810

.
vvi-u.5
for
100254599

.
vvi-u.5
for
100257773

.
vvi-u.5
for
100254744

.
ppo-u.5
for
7458419

.
ppo-u.5
for
18105158

.
mtr-u.5
for
11423313

.
mtr-u.5
for
11427294

.
sly-u.5
for
101265771

.
sly-u.5
for
101248347

.
osa-u.5
for
4349332

.
zma-u.5
for
100382650

.


Ortholog ID: 3947
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT4G31810 AT3G60510 LOC100790810 LOC100801676 LOC101248347 LOC101265771 LOC4349332 LOC100382650 LOC103834589 LOC103830260 LOC100254744 LOC100254599 LOC18105158 LOC7458419 LOC11423313 LOC11427294 LOC123181610 LOC123127713 LOC123438385 LOC107906823 LOC107924012 LOC106446121 LOC106452578 LOC8058111 LOC102586275 LOC102591947 LOC102626887 LOC102615167 LOC100839535 LOC107759386 LOC107792681
Function* ATP-dependent caseinolytic (Clp) protease/crotonase family protein ATP-dependent caseinolytic (Clp) protease/crotonase family protein 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial small ribosomal subunit protein mS47 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial uncharacterized LOC100382650 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
ath00640 Propanoate metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 8
ath00640 Propanoate metabolism 6
ath01200 Carbon metabolism 4
ath00410 beta-Alanine metabolism 3
ath00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
gma01200 Carbon metabolism 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 2
gma03018 RNA degradation 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 4
sly01200 Carbon metabolism 3
sly00310 Lysine degradation 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03050 Proteasome 3
zma03083 Polycomb repressive complex 2
zma00640 Propanoate metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00860 Porphyrin metabolism 2
vvi04148 Efferocytosis 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr04146 Peroxisome 2
mtr00350 Tyrosine metabolism 2
mtr00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae00280 Valine, leucine and isoleucine degradation 3
tae00410 beta-Alanine metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00280 Valine, leucine and isoleucine degradation 3
tae00410 beta-Alanine metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna03050 Proteasome 4
bna00280 Valine, leucine and isoleucine degradation 2
bna00410 beta-Alanine metabolism 2
bna00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna00280 Valine, leucine and isoleucine degradation 2
bna00410 beta-Alanine metabolism 2
bna00640 Propanoate metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03050 Proteasome 2
sbi00190 Oxidative phosphorylation 2
sbi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 6
sot00640 Propanoate metabolism 4
sot00410 beta-Alanine metabolism 3
sot01200 Carbon metabolism 2
sot00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00940 Phenylpropanoid biosynthesis 2
cit00900 Terpenoid backbone biosynthesis 2
cit00941 Flavonoid biosynthesis 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00410 beta-Alanine metabolism 2
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829310 825222 100790810 100801676 101248347 101265771 4349332 100382650 103834589 103830260 100254744 100254599 18105158 7458419 11423313 11427294 123181610 123127713 123438385 107906823 107924012 106446121 106452578 8058111 102586275 102591947 102626887 102615167 100839535 107759386 107792681
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