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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107960776   protein CHROMATIN REMODELING 4 
 gma-u.5   100781893   helicase protein MOM1 
 gma-u.5   100813574   chromodomain-helicase-DNA-binding protein 8 
 gma-u.5   100810773   helicase protein MOM1 
 vvi-u.5   100258707   helicase protein MOM1 
 ppo-u.5   18098215   helicase protein MOM1-like 
 ppo-u.5   7465229   helicase protein MOM1 
 mtr-u.5   25499318   chromodomain-helicase-DNA-binding protein 3 
 mtr-u.5   25487826   helicase protein MOM1 
 mtr-u.5   25487831   helicase protein MOM1 
 sly-u.5   101246671   uncharacterized LOC101246671 
 sly-u.5   101255404   helicase protein MOM1-like 
 osa-u.5   4339840   uncharacterized LOC4339840 
 osa-u.5   4328044   uncharacterized LOC4328044 
 zma-u.5   103638205   Helicase protein MOM1 

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Top 50 coexpressed genes to 107960776 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107960776 (ghi-r.1 coexpression data)

CoexMap"107960776"


ghiLOC107960776 | Entrez gene ID : 107960776    
Species ghi gma vvi ppo mtr sly osa zma bdi hvu bra cit bna ath sbi sot nta cre tae
Paralog 1 3 1 2 3 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03082 [list] [network] ATP-dependent chromatin remodeling (185 genes)
GO BP
GO:0006338 [list] [network] chromatin remodeling  (356 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (561 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (93 genes)  IEA  
GO:0042393 [list] [network] histone binding  (158 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (366 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016752544.2 [sequence] [blastp]
XP_040969211.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 2,  mito 1,  golg_plas 1  (predict for XP_016752544.2)
nucl 6,  cysk 2,  mito 1,  golg_plas 1  (predict for XP_040969211.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_016752544.2)
other 7,  mito 3  (predict for XP_040969211.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107960776
gma-u.5
for
100781893
gma-u.5
for
100813574
gma-u.5
for
100810773
vvi-u.5
for
100258707
ppo-u.5
for
18098215
ppo-u.5
for
7465229
mtr-u.5
for
25499318
mtr-u.5
for
25487826
mtr-u.5
for
25487831
sly-u.5
for
101246671
sly-u.5
for
101255404
osa-u.5
for
4339840
osa-u.5
for
4328044
zma-u.5
for
103638205


Ortholog ID: 3182
Species ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107962768 LOC107943834 LOC102618463 LOC100813574 LOC100810773 LOC100258707 LOC7465229 LOC18098215 LOC25499318 LOC25487826 LOC101246671 LOC101255404 LOC102605901 LOC102598312 LOC107778345 LOC107816341 LOC4328044 LOC4339840 LOC103638205 LOC123135515 LOC123153948 LOC123406185 LOC123452014 LOC8065356 LOC8066503 LOC100840452 LOC100841039 CHLRE_12g537671v5
Function* helicase protein MOM1 helicase protein MOM1 helicase protein MOM1 chromodomain-helicase-DNA-binding protein 8 helicase protein MOM1 helicase protein MOM1 helicase protein MOM1 helicase protein MOM1-like chromodomain-helicase-DNA-binding protein 3 helicase protein MOM1 uncharacterized LOC101246671 helicase protein MOM1-like protein CHROMATIN REMODELING 4-like helicase protein MOM1-like uncharacterized LOC107778345 uncharacterized LOC107816341 uncharacterized LOC4328044 uncharacterized LOC4339840 Helicase protein MOM1 uncharacterized LOC123135515 uncharacterized LOC123153948 uncharacterized LOC123406185 uncharacterized LOC123452014 uncharacterized LOC8065356 uncharacterized LOC8066503 CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi04120 Ubiquitin mediated proteolysis 4
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03082 ATP-dependent chromatin remodeling 3
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 3
gma00500 Starch and sucrose metabolism 3
gma03082 ATP-dependent chromatin remodeling 2
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 7
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00562 Inositol phosphate metabolism 3
sly04070 Phosphatidylinositol signaling system 3
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03082 ATP-dependent chromatin remodeling 2
nta04814 Motor proteins 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
nta03018 RNA degradation 2
nta04120 Ubiquitin mediated proteolysis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03040 Spliceosome 2
zma04136 Autophagy - other 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 4
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03013 Nucleocytoplasmic transport 2
sbi04136 Autophagy - other 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962768 107943834 102618463 100813574 100810773 100258707 7465229 18098215 25499318 25487826 101246671 101255404 102605901 102598312 107778345 107816341 4328044 4339840 103638205 123135515 123153948 123406185 123452014 8065356 8066503 100840452 100841039 5718460
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