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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107960827   proline-rich receptor-like protein kinase PERK12 
 ghi-r.1   121217769   classical arabinogalactan protein 6 
 ghi-r.1   121215571   proline-rich receptor-like protein kinase PERK12 
 ghi-r.1   107906213   predicted GPI-anchored protein 58 
 ath-u.5   AT3G45230   hydroxyproline-rich glycoprotein family protein 
 bna-r.1   111203927   vegetative cell wall protein gp1-like 
 bna-r.1   111213709   classical arabinogalactan protein 9-like 
 cit-r.1   102629898   alpha carbonic anhydrase 8-like 
 gma-u.5   112998382   vegetative cell wall protein gp1 
 gma-u.5   106795242   vegetative cell wall protein gp1-like 
 gma-u.5   102664993   cyclin-dependent kinase inhibitor 1C 
 vvi-u.5   100251941   uncharacterized LOC100251941 
 ppo-u.5   7489338   classical arabinogalactan protein 10 
 ppo-u.5   18098190   vegetative cell wall protein gp1 
 mtr-u.5   11412798   alpha carbonic anhydrase 8 
 mtr-u.5   25494421   classical arabinogalactan protein 10 
 sly-u.5   101266034   proline-rich receptor-like protein kinase PERK13 
 sly-u.5   101257531   arabinogalactan protein 1 
 sot-r.1   102580233   arabinogalactan protein 1-like 
 sot-r.1   102596397   mucin-1-like 
 nta-r.1   107796385   uncharacterized LOC107796385 
 osa-u.5   4334811   predicted GPI-anchored protein 58 
 zma-u.5   100281132   uncharacterized LOC100281132 
 tae-r.2   123126294   mucin-1 
 tae-r.2   123117835   vegetative cell wall protein gp1 
 tae-r.2   123082595   mucin-1 
 hvu-r.1   123399602   cyclin-dependent kinase inhibitor 1C-like 
 sbi-r.1   8060858   classical arabinogalactan protein 2 
 bdi-r.1   100842093   mucin-1 

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Top 50 coexpressed genes to 107960827 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107960827 (ghi-r.1 coexpression data)

CoexMap"107960827"


ghiLOC107960827 | Entrez gene ID : 107960827    
Species ghi ath bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre
Paralog 4 1 2 1 3 1 2 2 2 2 1 1 1 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016752588.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 7,  plas 1,  mito 1,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_016752588.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_016752588.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107960827
ghi-r.1
for
121217769
ghi-r.1
for
121215571
ghi-r.1
for
107906213
ath-u.5
for
AT3G45230
bna-r.1
for
111203927
bna-r.1
for
111213709
cit-r.1
for
102629898
gma-u.5
for
112998382
gma-u.5
for
106795242
gma-u.5
for
102664993
vvi-u.5
for
100251941
ppo-u.5
for
7489338
ppo-u.5
for
18098190
mtr-u.5
for
11412798
mtr-u.5
for
25494421
sly-u.5
for
101266034
sly-u.5
for
101257531
sot-r.1
for
102580233
sot-r.1
for
102596397
nta-r.1
for
107796385
osa-u.5
for
4334811
zma-u.5
for
100281132
tae-r.2
for
123126294
tae-r.2
for
123117835
tae-r.2
for
123082595
hvu-r.1
for
123399602
sbi-r.1
for
8060858
bdi-r.1
for
100842093


Ortholog ID: 5770
Species ghi ghi ghi ath bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta osa zma tae tae tae hvu sbi bdi
Symbol LOC121217769 LOC121215571 LOC107906213 AT3G45230 LOC111203927 LOC111213709 LOC102629898 LOC112998382 LOC106795242 LOC102664993 LOC100251941 LOC7489338 LOC18098190 LOC11412798 LOC25494421 LOC101266034 LOC101257531 LOC102580233 LOC102596397 LOC107796385 LOC4334811 LOC100281132 LOC123126294 LOC123117835 LOC123082595 LOC123399602 LOC8060858 LOC100842093
Function* classical arabinogalactan protein 6 proline-rich receptor-like protein kinase PERK12 predicted GPI-anchored protein 58 hydroxyproline-rich glycoprotein family protein vegetative cell wall protein gp1-like classical arabinogalactan protein 9-like alpha carbonic anhydrase 8-like vegetative cell wall protein gp1 vegetative cell wall protein gp1-like cyclin-dependent kinase inhibitor 1C uncharacterized LOC100251941 classical arabinogalactan protein 10 vegetative cell wall protein gp1 alpha carbonic anhydrase 8 classical arabinogalactan protein 10 proline-rich receptor-like protein kinase PERK13 arabinogalactan protein 1 arabinogalactan protein 1-like mucin-1-like uncharacterized LOC107796385 predicted GPI-anchored protein 58 uncharacterized LOC100281132 mucin-1 vegetative cell wall protein gp1 mucin-1 cyclin-dependent kinase inhibitor 1C-like classical arabinogalactan protein 2 mucin-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 3
ghi00541 Biosynthesis of various nucleotide sugars 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi03013 Nucleocytoplasmic transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 3
ghi00541 Biosynthesis of various nucleotide sugars 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi03013 Nucleocytoplasmic transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00051 Fructose and mannose metabolism 3
ghi00541 Biosynthesis of various nucleotide sugars 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi03013 Nucleocytoplasmic transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 3
cit01250 Biosynthesis of nucleotide sugars 3
cit00053 Ascorbate and aldarate metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 6
ppo00541 Biosynthesis of various nucleotide sugars 4
ppo01250 Biosynthesis of nucleotide sugars 4
ppo00270 Cysteine and methionine metabolism 4
ppo00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00541 Biosynthesis of various nucleotide sugars 4
ppo01250 Biosynthesis of nucleotide sugars 4
ppo04814 Motor proteins 3
ppo01240 Biosynthesis of cofactors 3
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01250 Biosynthesis of nucleotide sugars 3
sly04144 Endocytosis 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00052 Galactose metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
osa00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00053 Ascorbate and aldarate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00541 Biosynthesis of various nucleotide sugars 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 4
hvu01230 Biosynthesis of amino acids 3
hvu01240 Biosynthesis of cofactors 3
hvu00670 One carbon pool by folate 2
hvu00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121217769 121215571 107906213 823659 111203927 111213709 102629898 112998382 106795242 102664993 100251941 7489338 18098190 11412798 25494421 101266034 101257531 102580233 102596397 107796385 4334811 100281132 123126294 123117835 123082595 123399602 8060858 100842093
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