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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107961723   ubiquitin carboxyl-terminal hydrolase 18 
 ghi-r.1   107901643   ubiquitin carboxyl-terminal hydrolase 18 
 ghi-r.1   107953715   ubiquitin carboxyl-terminal hydrolase 18 
 ghi-r.1   107939429   ubiquitin carboxyl-terminal hydrolase 19 
 ath-u.5   UBP19   ubiquitin-specific protease 19 
 ath-u.5   UBP18   ubiquitin-specific protease 18 
 bra-r.6   103864566   ubiquitin carboxyl-terminal hydrolase 19 
 bra-r.6   103851629   ubiquitin carboxyl-terminal hydrolase 18 
 bra-r.6   103842238   ubiquitin carboxyl-terminal hydrolase 19 
 bna-r.1   106354736   ubiquitin carboxyl-terminal hydrolase 18-like 
 bna-r.1   106446670   ubiquitin carboxyl-terminal hydrolase 19-like 
 bna-r.1   106446660   ubiquitin carboxyl-terminal hydrolase 19 
 cit-r.1   102607963   ubiquitin carboxyl-terminal hydrolase 18 
 gma-u.5   100799652   ubiquitin carboxyl-terminal hydrolase 18 
 gma-u.5   100817913   ubiquitin carboxyl-terminal hydrolase 18 
 gma-u.5   100820594   ubiquitin carboxyl-terminal hydrolase 18 
 vvi-u.5   100246913   ubiquitin carboxyl-terminal hydrolase 18 
 ppo-u.5   7459906   ubiquitin carboxyl-terminal hydrolase 18 
 ppo-u.5   7458720   ubiquitin carboxyl-terminal hydrolase 18 
 mtr-u.5   25481970   ubiquitin carboxyl-terminal hydrolase 18 
 sly-u.5   101244268   ubiquitin carboxyl-terminal hydrolase 18 
 sly-u.5   101247350   ubiquitin carboxyl-terminal hydrolase 18 
 sot-r.1   102605211   ubiquitin carboxyl-terminal hydrolase 18-like 
 sot-r.1   102580922   ubiquitin carboxyl-terminal hydrolase 18 
 nta-r.1   107831642   ubiquitin carboxyl-terminal hydrolase 18 
 nta-r.1   107790130   ubiquitin carboxyl-terminal hydrolase 18-like 
 osa-u.5   4350688   ubiquitin carboxyl-terminal hydrolase 18 
 osa-u.5   4341708   ubiquitin carboxyl-terminal hydrolase 15 
 zma-u.5   103629692   ubiquitin carboxyl-terminal hydrolase 18 
 tae-r.2   123149400   ubiquitin carboxyl-terminal hydrolase 42 
 tae-r.2   123155834   ubiquitin carboxyl-terminal hydrolase 19 
 tae-r.2   123171574   uncharacterized LOC123171574 
 hvu-r.1   123407131   ubiquitin carboxyl-terminal hydrolase 42-like 
 sbi-r.1   8069359   ubiquitin carboxyl-terminal hydrolase 18 
 bdi-r.1   100846465   ubiquitin carboxyl-terminal hydrolase 19 

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Top 50 coexpressed genes to 107961723 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107961723 (ghi-r.1 coexpression data)

CoexMap"107961723"


ghiLOC107961723 | Entrez gene ID : 107961723    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 2 1 2 2 2 2 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (190 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (141 genes)  IEA  
Protein XP_016753300.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  extr 1,  nucl_plas 1  (predict for XP_016753300.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016753300.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107961723
ghi-r.1
for
107901643
ghi-r.1
for
107953715
ghi-r.1
for
107939429
ath-u.5
for
UBP19
ath-u.5
for
UBP18
bra-r.6
for
103864566
bra-r.6
for
103851629
bra-r.6
for
103842238
bna-r.1
for
106354736
bna-r.1
for
106446670
bna-r.1
for
106446660
cit-r.1
for
102607963
gma-u.5
for
100799652
gma-u.5
for
100817913
gma-u.5
for
100820594
vvi-u.5
for
100246913
ppo-u.5
for
7459906
ppo-u.5
for
7458720
mtr-u.5
for
25481970
sly-u.5
for
101244268
sly-u.5
for
101247350
sot-r.1
for
102605211
sot-r.1
for
102580922
nta-r.1
for
107831642
nta-r.1
for
107790130
osa-u.5
for
4350688
osa-u.5
for
4341708
zma-u.5
for
103629692
tae-r.2
for
123149400
tae-r.2
for
123155834
tae-r.2
for
123171574
hvu-r.1
for
123407131
sbi-r.1
for
8069359
bdi-r.1
for
100846465


Ortholog ID: 4870
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta osa osa zma tae tae tae hvu sbi bdi
Symbol LOC107961723 LOC107953715 LOC107939429 UBP19 UBP18 LOC103864566 LOC103851629 LOC103842238 LOC106354736 LOC106446670 LOC106446660 LOC102607963 LOC100799652 LOC100820594 LOC100810577 LOC100246913 LOC7459906 LOC7458720 LOC25481970 LOC101244268 LOC101247350 LOC102605211 LOC102580922 LOC107831642 LOC107790130 LOC4350688 LOC4341708 LOC103629692 LOC123149400 LOC123155834 LOC123127719 LOC123407131 LOC8069359 LOC100846465
Function* ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin-specific protease 19 ubiquitin-specific protease 18 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 18-like ubiquitin carboxyl-terminal hydrolase 19-like ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18-like ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 18-like ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 15 ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 42 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 19 ubiquitin carboxyl-terminal hydrolase 42-like ubiquitin carboxyl-terminal hydrolase 18 ubiquitin carboxyl-terminal hydrolase 19
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04148 Efferocytosis 2
cit03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 6
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 8
sot03040 Spliceosome 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
nta00561 Glycerolipid metabolism 2
nta00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107961723 107953715 107939429 817000 829295 103864566 103851629 103842238 106354736 106446670 106446660 102607963 100799652 100820594 100810577 100246913 7459906 7458720 25481970 101244268 101247350 102605211 102580922 107831642 107790130 4350688 4341708 103629692 123149400 123155834 123127719 123407131 8069359 100846465
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