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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107961764   putative RNA methyltransferase At5g10620 
 ghi-r.1   107902008   putative RNA methyltransferase At5g10620 
 ath-u.5   AT5G10620   methyltransferase 
 bra-r.6   103846789   putative RNA methyltransferase At5g10620 
 cit-r.1   102612386   putative RNA methyltransferase At5g10620 
 gma-u.5   100817089   putative RNA methyltransferase At5g10620 
 gma-u.5   100796609   putative RNA methyltransferase At5g10620 
 vvi-u.5   100262959   putative RNA methyltransferase At5g10620 
 ppo-u.5   18100788   putative RNA methyltransferase At5g10620 
 mtr-u.5   25481888   putative RNA methyltransferase At5g10620 
 sly-u.5   101244853   putative RNA methyltransferase 
 sot-r.1   102583261   putative RNA methyltransferase At5g10620 
 nta-r.1   107780045   putative RNA methyltransferase At5g10620 
 nta-r.1   107813058   putative RNA methyltransferase At5g10620 
 osa-u.5   4336921   putative RNA methyltransferase At5g10620 
 zma-u.5   100194016   uncharacterized LOC100194016 
 hvu-r.1   123427680   putative RNA methyltransferase At5g10620 
 sbi-r.1   8063937   putative RNA methyltransferase At5g10620 
 bdi-r.1   100826310   putative RNA methyltransferase At5g10620 
 cre-r.1   CHLRE_16g680100v5   uncharacterized protein 

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Top 50 coexpressed genes to 107961764 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107961764 (ghi-r.1 coexpression data)

CoexMap"107961764"


ghiLOC107961764 | Entrez gene ID : 107961764    
Species ghi ath bra cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre bna tae
Paralog 2 1 1 1 2 1 1 1 1 1 2 1 1 1 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (477 genes)  IEA  
GO CC
GO MF
GO:0008168 [list] [network] methyltransferase activity  (698 genes)  IEA  
Protein XP_016753372.1 [sequence] [blastp]
XP_016753373.1 [sequence] [blastp]
XP_016753376.1 [sequence] [blastp]
XP_040971518.1 [sequence] [blastp]
XP_040971519.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  vacu 1,  cyto_nucl 1  (predict for XP_016753372.1)
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_016753373.1)
chlo 9  (predict for XP_016753376.1)
chlo 5,  mito 4,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040971518.1)
chlo 7,  mito 3  (predict for XP_040971519.1)
Subcellular
localization
TargetP
other 2  (predict for XP_016753372.1)
other 2  (predict for XP_016753373.1)
other 2  (predict for XP_016753376.1)
mito 5,  other 3  (predict for XP_040971518.1)
mito 5,  other 3  (predict for XP_040971519.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107961764
ghi-r.1
for
107902008
ath-u.5
for
AT5G10620
bra-r.6
for
103846789
cit-r.1
for
102612386
gma-u.5
for
100817089
gma-u.5
for
100796609
vvi-u.5
for
100262959
ppo-u.5
for
18100788
mtr-u.5
for
25481888
sly-u.5
for
101244853
sot-r.1
for
102583261
nta-r.1
for
107780045
nta-r.1
for
107813058
osa-u.5
for
4336921
zma-u.5
for
100194016
hvu-r.1
for
123427680
sbi-r.1
for
8063937
bdi-r.1
for
100826310
cre-r.1
for
CHLRE_16g680100v5


Ortholog ID: 7324
Species ghi ghi ath bra cit gma gma vvi ppo mtr sly sot nta nta osa zma hvu sbi bdi cre
Symbol LOC107961764 LOC107902008 AT5G10620 LOC103846789 LOC102612386 LOC100817089 LOC100796609 LOC100262959 LOC18100788 LOC25481888 LOC101244853 LOC102583261 LOC107780045 LOC107813058 LOC4336921 LOC100194016 LOC123427680 LOC8063937 LOC100826310 CHLRE_16g680100v5
Function* putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 methyltransferase putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 uncharacterized LOC100194016 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 putative RNA methyltransferase At5g10620 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 2
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma01230 Biosynthesis of amino acids 3
zma00220 Arginine biosynthesis 2
zma00240 Pyrimidine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 3
cre03008 Ribosome biogenesis in eukaryotes 2
cre01232 Nucleotide metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107961764 107902008 830927 103846789 102612386 100817089 100796609 100262959 18100788 25481888 101244853 102583261 107780045 107813058 4336921 100194016 123427680 8063937 100826310 5721549
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