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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962248   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 ghi-r.1   107954818   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 ath-u.5   AT3G02450   cell division protein ftsH 
 bra-r.6   103870914   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 bna-r.1   125587574   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 bna-r.1   106382863   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 cit-r.1   102607258   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 gma-u.5   100814196   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 gma-u.5   100802233   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 vvi-u.5   100249724   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 ppo-u.5   7468374   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 ppo-u.5   112326557   ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like 
 mtr-u.5   25495520   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 sly-u.5   101258831   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 sot-r.1   102599709   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 sot-r.1   102590643   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 nta-r.1   107792682   putative inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 nta-r.1   107785289   putative inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 osa-u.5   4336096   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 zma-u.5   103646347   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 tae-r.2   123189474   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 tae-r.2   123053579   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 tae-r.2   123045707   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 hvu-r.1   123426956   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 sbi-r.1   110436353   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 bdi-r.1   104585358   probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic 
 cre-r.1   CHLRE_09g393950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107962248 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962248 (ghi-r.1 coexpression data)

CoexMap"107962248"


ghiLOC107962248 | Entrez gene ID : 107962248    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 2 1 1 2 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (1903 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (354 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (96 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016754054.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_016754054.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016754054.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962248
ghi-r.1
for
107954818
ath-u.5
for
AT3G02450
bra-r.6
for
103870914
bna-r.1
for
125587574
bna-r.1
for
106382863
cit-r.1
for
102607258
gma-u.5
for
100814196
gma-u.5
for
100802233
vvi-u.5
for
100249724
ppo-u.5
for
7468374
ppo-u.5
for
112326557
mtr-u.5
for
25495520
sly-u.5
for
101258831
sot-r.1
for
102599709
sot-r.1
for
102590643
nta-r.1
for
107792682
nta-r.1
for
107785289
osa-u.5
for
4336096
zma-u.5
for
103646347
tae-r.2
for
123189474
tae-r.2
for
123053579
tae-r.2
for
123045707
hvu-r.1
for
123426956
sbi-r.1
for
110436353
bdi-r.1
for
104585358
cre-r.1
for
CHLRE_09g393950v5


Ortholog ID: 8945
Species ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107962248 LOC107954818 AT3G02450 LOC103870914 LOC125587574 LOC106382863 LOC102607258 LOC100814196 LOC100802233 LOC100249724 LOC7468374 LOC112326557 LOC25495520 LOC101258831 LOC102599709 LOC102590643 LOC107792682 LOC107785289 LOC4336096 LOC103646347 LOC123189474 LOC123053579 LOC123045707 LOC123426956 LOC110436353 LOC104585358 CHLRE_09g393950v5
Function* probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic cell division protein ftsH probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic putative inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic putative inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03040 Spliceosome 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962248 107954818 821139 103870914 125587574 106382863 102607258 100814196 100802233 100249724 7468374 112326557 25495520 101258831 102599709 102590643 107792682 107785289 4336096 103646347 123189474 123053579 123045707 123426956 110436353 104585358 5720126
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