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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962298   SAP-like protein BP-73 
 ghi-r.1   107901698   SAP-like protein BP-73 
 ath-u.5   AT4G18740   Rho termination factor 
 bra-r.6   103856784   uncharacterized LOC103856784 
 bna-r.1   106404303   uncharacterized LOC106404303 
 bna-r.1   BNAC01G11170D   uncharacterized BNAC01G11170D 
 cit-r.1   102630392   SAP-like protein BP-73 
 vvi-u.5   100256599   SAP-like protein BP-73 
 ppo-u.5   7476328   uncharacterized LOC7476328 
 ppo-u.5   7463822   SAP-like protein BP-73 
 sly-u.5   101255261   SAP-like protein BP-73 
 sot-r.1   102600290   SAP-like protein BP-73 
 nta-r.1   107803781   uncharacterized LOC107803781 
 nta-r.1   107831262   uncharacterized LOC107831262 
 osa-u.5   4327085   uncharacterized LOC4327085 
 zma-u.5   100285344   uncharacterized LOC100285344 
 tae-r.2   123077680   uncharacterized LOC123077680 
 tae-r.2   123069153   uncharacterized LOC123069153 
 hvu-r.1   123443090   uncharacterized LOC123443090 
 bdi-r.1   100838460   uncharacterized LOC100838460 

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Top 50 coexpressed genes to 107962298 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962298 (ghi-r.1 coexpression data)

CoexMap"107962298"


ghiLOC107962298 | Entrez gene ID : 107962298    
Species ghi ath bra bna cit vvi ppo sly sot nta osa zma tae hvu bdi sbi cre gma mtr
Paralog 2 1 1 2 1 1 2 1 1 2 1 1 2 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006353 [list] [network] DNA-templated transcription termination  (30 genes)  IEA  
GO CC
GO MF
Protein XP_016754107.1 [sequence] [blastp]
XP_016754109.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  vacu 1,  cyto 1,  extr 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1  (predict for XP_016754107.1)
nucl 6,  cyto_nucl 4,  mito 1,  chlo 1,  plas 1,  vacu 1,  cyto_mito 1  (predict for XP_016754109.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016754107.1)
chlo 8,  other 4  (predict for XP_016754109.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962298
ghi-r.1
for
107901698
ath-u.5
for
AT4G18740
bra-r.6
for
103856784
bna-r.1
for
106404303
bna-r.1
for
BNAC01G11170D
cit-r.1
for
102630392
vvi-u.5
for
100256599
ppo-u.5
for
7476328
ppo-u.5
for
7463822
sly-u.5
for
101255261
sot-r.1
for
102600290
nta-r.1
for
107803781
nta-r.1
for
107831262
osa-u.5
for
4327085
zma-u.5
for
100285344
tae-r.2
for
123077680
tae-r.2
for
123069153
hvu-r.1
for
123443090
bdi-r.1
for
100838460


Ortholog ID: 11985
Species ghi ghi ath bra bna bna cit vvi ppo ppo sly sot nta nta osa zma tae tae hvu bdi
Symbol LOC107962298 LOC107901698 AT4G18740 LOC103856784 LOC106404303 BNAC01G11170D LOC102630392 LOC100256599 LOC7476328 LOC7463822 LOC101255261 LOC102600290 LOC107803781 LOC107831262 LOC4327085 LOC100285344 LOC123077680 LOC123069153 LOC123443090 LOC100838460
Function* SAP-like protein BP-73 SAP-like protein BP-73 Rho termination factor uncharacterized LOC103856784 uncharacterized LOC106404303 uncharacterized BNAC01G11170D SAP-like protein BP-73 SAP-like protein BP-73 uncharacterized LOC7476328 SAP-like protein BP-73 SAP-like protein BP-73 SAP-like protein BP-73 uncharacterized LOC107803781 uncharacterized LOC107831262 uncharacterized LOC4327085 uncharacterized LOC100285344 uncharacterized LOC123077680 uncharacterized LOC123069153 uncharacterized LOC123443090 uncharacterized LOC100838460
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00710 Carbon fixation by Calvin cycle 5
ath00010 Glycolysis / Gluconeogenesis 2
ath00030 Pentose phosphate pathway 2
ath00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
bna00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 3
cit00220 Arginine biosynthesis 2
cit00250 Alanine, aspartate and glutamate metabolism 2
cit00910 Nitrogen metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo00230 Purine metabolism 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 5
sly04712 Circadian rhythm - plant 2
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 5
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962298 107901698 827608 103856784 106404303 106431801 102630392 100256599 7476328 7463822 101255261 102600290 107803781 107831262 4327085 100285344 123077680 123069153 123443090 100838460
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