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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962620   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107943215   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107942472   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ghi-r.1   107962897   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ath-u.5   AT3G47650   DnaJ/Hsp40 cysteine-rich domain superfamily protein 
 bra-r.6   103873575   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bra-r.6   103873219   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bna-r.1   106350229   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 bna-r.1   111215524   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 bna-r.1   106347609   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 cit-r.1   102618635   hypothetical protein 
 cit-r.1   102627939   hypothetical protein 
 gma-u.5   100500330   uncharacterized LOC100500330 
 gma-u.5   100808293   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 gma-u.5   100788324   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 vvi-u.5   100854903   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ppo-u.5   18107674   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 ppo-u.5   7462985   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 mtr-u.5   11439220   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 sly-u.5   101257241   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 sot-r.1   102600333   uncharacterized LOC102600333 
 nta-r.1   142162842   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 nta-r.1   107784071   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 nta-r.1   107796173   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like 
 osa-u.5   4340929   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 zma-u.5   732793   bundle sheath defective 2 
 tae-r.2   123169427   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123161590   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 tae-r.2   123147846   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 hvu-r.1   123412214   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 sbi-r.1   8068178   uncharacterized LOC8068178 
 bdi-r.1   100836490   uncharacterized LOC100836490 

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Top 50 coexpressed genes to 107962620 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962620 (ghi-r.1 coexpression data)

CoexMap"107962620"


ghiLOC107962620 | Entrez gene ID : 107962620    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 2 3 1 2 1 1 1 3 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0101031 [list] [network] protein folding chaperone complex  (37 genes)  IEA  
GO:0009570 [list] [network] chloroplast stroma  (302 genes)  IEA  
GO MF
GO:0044183 [list] [network] protein folding chaperone  (181 genes)  IEA  
Protein XP_016754564.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 4  (predict for XP_016754564.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016754564.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962620
ghi-r.1
for
107943215
ghi-r.1
for
107942472
ghi-r.1
for
107962897
ath-u.5
for
AT3G47650
bra-r.6
for
103873575
bra-r.6
for
103873219
bna-r.1
for
106350229
bna-r.1
for
111215524
bna-r.1
for
106347609
cit-r.1
for
102618635
cit-r.1
for
102627939
gma-u.5
for
100500330
gma-u.5
for
100808293
gma-u.5
for
100788324
vvi-u.5
for
100854903
ppo-u.5
for
18107674
ppo-u.5
for
7462985
mtr-u.5
for
11439220
sly-u.5
for
101257241
sot-r.1
for
102600333
nta-r.1
for
142162842
nta-r.1
for
107784071
nta-r.1
for
107796173
osa-u.5
for
4340929
zma-u.5
for
732793
tae-r.2
for
123169427
tae-r.2
for
123161590
tae-r.2
for
123147846
hvu-r.1
for
123412214
sbi-r.1
for
8068178
bdi-r.1
for
100836490


Ortholog ID: 4401
Species ghi ghi ghi ath bra bra bna bna bna cit cit gma gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107943215 LOC107942472 LOC107962897 AT3G47650 LOC103873575 LOC103873219 LOC106347609 LOC106425472 BNAA01G20230D LOC102618635 LOC102627939 LOC100500330 LOC100808293 LOC100788324 LOC100854903 LOC18107674 LOC7462985 LOC11439220 LOC101257241 LOC102600333 LOC142162842 LOC107784071 LOC107784072 LOC4340929 LOC732793 LOC123169427 LOC123161590 LOC123147846 LOC123412214 LOC8068178 LOC100836490
Function* protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic DnaJ/Hsp40 cysteine-rich domain superfamily protein protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic hypothetical protein hypothetical protein uncharacterized LOC100500330 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic uncharacterized LOC102600333 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic bundle sheath defective 2 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic uncharacterized LOC8068178 uncharacterized LOC100836490
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi00785 Lipoic acid metabolism 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra01200 Carbon metabolism 2
bra00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00195 Photosynthesis 3
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107943215 107942472 107962897 823919 103873575 103873219 106347609 106425472 106416172 102618635 102627939 100500330 100808293 100788324 100854903 18107674 7462985 11439220 101257241 102600333 142162842 107784071 107784072 4340929 732793 123169427 123161590 123147846 123412214 8068178 100836490
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