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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962686   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 ath-u.5   AT2G44040   Dihydrodipicolinate reductase, bacterial/plant 
 ath-u.5   AT3G59890   Dihydrodipicolinate reductase, bacterial/plant 
 gma-u.5   100807997   dihydrodipicolinate reductase 2, chloroplastic-like 
 gma-u.5   100819889   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 vvi-u.5   100268085   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 ppo-u.5   18106400   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 mtr-u.5   25500770   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 sly-u.5   101253321   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like 
 osa-u.5   4329224   probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 osa-u.5   4332231   probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 zma-u.5   100194039   4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 
 zma-u.5   100272879   4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 

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Top 50 coexpressed genes to 107962686 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962686 (ghi-r.1 coexpression data)

CoexMap"107962686"


ghiLOC107962686 | Entrez gene ID : 107962686    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 2 2 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00261 [list] [network] Monobactam biosynthesis (24 genes)
ghi00300 [list] [network] Lysine biosynthesis (28 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0019877 [list] [network] diaminopimelate biosynthetic process  (5 genes)  IEA  
GO:0009089 [list] [network] lysine biosynthetic process via diaminopimelate  (25 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (302 genes)  IEA  
GO MF
GO:0008839 [list] [network] 4-hydroxy-tetrahydrodipicolinate reductase  (7 genes)  IEA  
GO:0070402 [list] [network] NADPH binding  (17 genes)  IEA  
Protein XP_040960980.1 [sequence] [blastp]
XP_040960981.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto_nucl 1,  mito 1,  golg_plas 1  (predict for XP_040960980.1)
chlo 7,  nucl 1,  cyto_nucl 1,  mito 1,  golg_plas 1  (predict for XP_040960981.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_040960980.1)
chlo 7  (predict for XP_040960981.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962686

.
ath-u.5
for
AT2G44040

.
ath-u.5
for
AT3G59890

.
gma-u.5
for
100807997

.
gma-u.5
for
100819889

.
vvi-u.5
for
100268085

.
ppo-u.5
for
18106400

.
mtr-u.5
for
25500770

.
sly-u.5
for
101253321

.
osa-u.5
for
4329224

.
osa-u.5
for
4332231

.
zma-u.5
for
100194039

.
zma-u.5
for
100272879

.


Ortholog ID: 4887
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi cit bdi bdi nta nta
Symbol AT2G44040 AT3G59890 LOC100807997 LOC100819889 LOC101253321 LOC4329224 LOC4332231 LOC100272879 LOC100194039 LOC103866117 LOC103858112 LOC100268085 LOC18106400 LOC25500770 LOC123092781 LOC123085178 LOC123425096 LOC123449167 LOC107962686 LOC107955285 LOC106391812 LOC106438204 CHLRE_14g627850v5 LOC110437410 LOC8054352 LOC102608984 LOC100834116 LOC100821746 LOC107813436 LOC107766908
Function* Dihydrodipicolinate reductase, bacterial/plant Dihydrodipicolinate reductase, bacterial/plant dihydrodipicolinate reductase 2, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic uncharacterized protein probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 7
ath00300 Lysine biosynthesis 4
ath01232 Nucleotide metabolism 3
ath00220 Arginine biosynthesis 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath00300 Lysine biosynthesis 3
ath01230 Biosynthesis of amino acids 3
ath00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 10
gma00300 Lysine biosynthesis 6
gma01200 Carbon metabolism 4
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00261 Monobactam biosynthesis 3
gma00300 Lysine biosynthesis 3
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01230 Biosynthesis of amino acids 5
osa00970 Aminoacyl-tRNA biosynthesis 4
osa00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma01240 Biosynthesis of cofactors 4
zma00860 Porphyrin metabolism 2
zma00061 Fatty acid biosynthesis 2
zma00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00970 Aminoacyl-tRNA biosynthesis 4
bra00261 Monobactam biosynthesis 2
bra00300 Lysine biosynthesis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 7
bra00250 Alanine, aspartate and glutamate metabolism 5
bra00230 Purine metabolism 4
bra01240 Biosynthesis of cofactors 4
bra01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi01240 Biosynthesis of cofactors 3
vvi00061 Fatty acid biosynthesis 2
vvi00780 Biotin metabolism 2
vvi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03015 mRNA surveillance pathway 2
hvu00300 Lysine biosynthesis 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00261 Monobactam biosynthesis 5
ghi00300 Lysine biosynthesis 5
ghi01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00261 Monobactam biosynthesis 5
ghi00300 Lysine biosynthesis 5
ghi03010 Ribosome 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 4
bna00300 Lysine biosynthesis 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 4
bna00300 Lysine biosynthesis 4
bna01230 Biosynthesis of amino acids 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01230 Biosynthesis of amino acids 3
sbi00230 Purine metabolism 2
sbi00061 Fatty acid biosynthesis 2
sbi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01230 Biosynthesis of amino acids 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi00220 Arginine biosynthesis 3
bdi00250 Alanine, aspartate and glutamate metabolism 3
bdi00300 Lysine biosynthesis 3
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta00261 Monobactam biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819009 825159 100807997 100819889 101253321 4329224 4332231 100272879 100194039 103866117 103858112 100268085 18106400 25500770 123092781 123085178 123425096 123449167 107962686 107955285 106391812 106438204 66056303 110437410 8054352 102608984 100834116 100821746 107813436 107766908
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