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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100256964   E3 ubiquitin-protein ligase RSL1 
 vvi-u.5   100252570   E3 ubiquitin-protein ligase RSL1 
 ppo-u.5   7467917   uncharacterized LOC7467917 
 ppo-u.5   18104531   E3 ubiquitin-protein ligase RSL1 
 sly-u.5   101243987   E3 ubiquitin-protein ligase RSL1-like 
 sly-u.5   101249062   E3 ubiquitin-protein ligase RSL1-like 
 sly-u.5   101250202   E3 ubiquitin-protein ligase RSL1 
 osa-u.5   4347079   uncharacterized LOC4347079 
 zma-u.5   100381983   putative RING zinc finger domain superfamily protein 
 zma-u.5   100194163   putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to 100256964 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100256964 (vvi-u.5 coexpression data)

CoexMap"107963003"


ghiLOC107963003 | Entrez gene ID : 107963003    
Species vvi ppo sly osa zma bdi mtr bra hvu cit gma bna ath sbi ghi sot nta cre tae
Paralog 2 2 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (67 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (426 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (55 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_016755095.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  cyto 1  (predict for XP_016755095.2)
Subcellular
localization
TargetP
mito 7  (predict for XP_016755095.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100256964
vvi-u.5
for
100252570
ppo-u.5
for
7467917
ppo-u.5
for
18104531
sly-u.5
for
101243987
sly-u.5
for
101249062
sly-u.5
for
101250202
osa-u.5
for
4347079
zma-u.5
for
100381983
zma-u.5
for
100194163


Ortholog ID: 369
Species ghi ghi cit vvi ppo ppo mtr sly sly sot nta zma zma hvu sbi sbi bdi cre cre
Symbol LOC107907073 LOC107958821 LOC102618889 LOC100252570 LOC18094363 LOC7467917 LOC25486596 LOC101247495 LOC101249062 LOC102585890 LOC107792398 LOC100381983 LOC100194163 LOC123431232 LOC8062109 LOC8062110 LOC100827708 CHLRE_01g060712v5 CHLRE_03g150850v5
Function* ranBP-type and C3HC4-type zinc finger-containing protein 1 probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1-like E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1 uncharacterized LOC7467917 probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1 E3 ubiquitin-protein ligase RSL1-like probable E3 ubiquitin-protein ligase RNF217 E3 ubiquitin-protein ligase RSL1 putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein uncharacterized LOC123431232 uncharacterized LOC8062109 probable E3 ubiquitin-protein ligase RNF144A-B uncharacterized protein DDB_G0292642 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03420 Nucleotide excision repair 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 4
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107907073 107958821 102618889 100252570 18094363 7467917 25486596 101247495 101249062 102585890 107792398 100381983 100194163 123431232 8062109 8062110 100827708 5725742 5721143
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