ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	108869627	AAA-ATPase At2g18193-like
bra-r.6	103874084	AAA-ATPase At2g18193
bra-r.6	103837845	AAA-ATPase At2g18193
bna-r.1	106442493	protein HYPER-SENSITIVITY-RELATED 4-like
bna-r.1	125583760	AAA-ATPase At2g18193-like
ath-u.5	AT5G17760	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ghi-r.1	121209826	AAA-ATPase At1g43910
ghi-r.1	107913055	AAA-ATPase At2g18193
ghi-r.1	107936550	AAA-ATPase At3g50940
cit-r.1	102616240	AAA-ATPase At2g18193-like
cit-r.1	102621885	AAA-ATPase At3g50940-like
gma-u.5	100812263	AAA-ATPase At3g50940
gma-u.5	100789716	protein HYPER-SENSITIVITY-RELATED 4
gma-u.5	100789621	AAA-ATPase At3g50940
vvi-u.5	100246206	AAA-ATPase At3g50940
vvi-u.5	100854173	AAA-ATPase At3g50940
ppo-u.5	7456363	AAA-ATPase At3g50940
mtr-u.5	11411859	AAA-ATPase At3g50940
mtr-u.5	11407775	AAA-ATPase At3g50940
mtr-u.5	120580616	AAA-ATPase At3g50940
sly-u.5	101265639	AAA-ATPase At3g50940-like
sly-u.5	101244925	protein HYPER-SENSITIVITY-RELATED 4
sly-u.5	101250191	protein HYPER-SENSITIVITY-RELATED 4-like
sot-r.1	102596073	protein HYPER-SENSITIVITY-RELATED 4-like
sot-r.1	102591847	AAA-ATPase At2g18193-like
nta-r.1	107798380	AAA-ATPase At3g50940-like
osa-u.5	4334468	AAA-ATPase At3g28580
osa-u.5	4333339	AAA-ATPase At3g50940
osa-u.5	4324105	AAA-ATPase At3g50940
zma-u.5	100281434	mitochondrial chaperone BCS1
zma-u.5	100281676	mitochondrial protein
tae-r.2	123161367	AAA-ATPase At3g50940
sbi-r.1	8080130	uncharacterized LOC8080130
sbi-r.1	8063668	AAA-ATPase At3g28600
bdi-r.1	100824372	AAA-ATPase At3g50940
cre-r.1	CHLRE_05g234661v5	uncharacterized protein
cre-r.1	CHLRE_02g106450v5	uncharacterized protein

Top 50 coexpressed genes to 108869627 (bra-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 108869627 (bra-r.6 coexpression data)

CoexMap"108869627"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0016887 [list] [network] ATP hydrolysis activity	(641 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2916 genes)	IEA

Protein

XP_033136734.1 [sequence] [blastp]
XP_033136735.1 [sequence] [blastp]
XP_033136736.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, E.R. 1, nucl 1, plas 1, extr 1, pero 1, nucl_plas 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_033136734.1)
chlo 6, E.R. 1, nucl 1, plas 1, extr 1, pero 1, nucl_plas 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_033136735.1)
chlo 6, E.R. 1, nucl 1, plas 1, extr 1, pero 1, nucl_plas 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_033136736.1)

Subcellular
localization
TargetP

scret 7	(predict for XP_033136734.1)
scret 7	(predict for XP_033136735.1)
scret 7	(predict for XP_033136736.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 108869627	bra-r.6 for 103874084	bra-r.6 for 103837845	bna-r.1 for 106442493	bna-r.1 for 125583760	ath-u.5 for AT5G17760	ghi-r.1 for 121209826	ghi-r.1 for 107913055	ghi-r.1 for 107936550	cit-r.1 for 102616240	cit-r.1 for 102621885	gma-u.5 for 100812263	gma-u.5 for 100789716	gma-u.5 for 100789621	vvi-u.5 for 100246206	vvi-u.5 for 100854173	ppo-u.5 for 7456363	mtr-u.5 for 11411859	mtr-u.5 for 11407775	mtr-u.5 for 120580616	sly-u.5 for 101265639	sly-u.5 for 101244925	sly-u.5 for 101250191	sot-r.1 for 102596073	sot-r.1 for 102591847	nta-r.1 for 107798380	osa-u.5 for 4334468	osa-u.5 for 4333339	osa-u.5 for 4324105	zma-u.5 for 100281434	zma-u.5 for 100281676	tae-r.2 for 123161367	sbi-r.1 for 8080130	sbi-r.1 for 8063668	bdi-r.1 for 100824372	cre-r.1 for CHLRE_05g234661v5	cre-r.1 for CHLRE_02g106450v5

Ortholog

Ortholog ID: 157

Species

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

sbi

bdi

cre

Symbol

Function^*

AAA-ATPase At2g18193

AAA-ATPase At5g17760

protein HYPER-SENSITIVITY-RELATED 4

AAA-ATPase At5g17760-like

AAA-ATPase At3g50940

AAA-ATPase At1g43910

protein HYPER-SENSITIVITY-RELATED 4-like

AAA-ATPase At3g50940

AAA-ATPase At2g18193

AAA-ATPase At3g50940

probable mitochondrial chaperone BCS1-B

uncharacterized LOC100241950

AAA-ATPase At3g50940

AAA-ATPase At5g17760

AAA-ATPase At3g50940

protein HYPER-SENSITIVITY-RELATED 4-like

AAA-ATPase At3g50940-like

AAA-ATPase At2g18193-like

AAA-ATPase At3g50940-like

protein HYPER-SENSITIVITY-RELATED 4-like

AAA-ATPase At3g50940-like

AAA-ATPase At3g50940

mitochondrial chaperone BCS1

mitochondrial protein

AAA-ATPase At3g50940

uncharacterized LOC8080130

AAA-ATPase At3g50940

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	4
bra04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2
bna00790	Folate biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2
bna00790	Folate biosynthesis	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01040	Biosynthesis of unsaturated fatty acids	4
sly01212	Fatty acid metabolism	4
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4
sbi04141	Protein processing in endoplasmic reticulum	4
sbi04144	Endocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	5
sbi04141	Protein processing in endoplasmic reticulum	5
sbi04144	Endocytosis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
bdi01230	Biosynthesis of amino acids	3
bdi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2
bdi00100	Steroid biosynthesis	2
bdi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00480	Glutathione metabolism	5
bdi01200	Carbon metabolism	4
bdi01230	Biosynthesis of amino acids	4
bdi00010	Glycolysis / Gluconeogenesis	3
bdi00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

103874084

103845903

106387745

106397457

125595180

107936550

107901206

102630983

102608161

100788270

100778503

100787726

100241950

100259595

7495497

18099250

7495496

120580616

11406855

11422577

101250191

101261461

102591847

102579261

102596396

107778321

4333339

4324105

4339775

100281434

100281676

123161367

123161357

8080130

8080132

100824372

100832286

100840525

5726192

66052449

The preparation time of this page was 0.1 [sec].


Species	bra	bna	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	sbi	bdi	cre	hvu
Paralog	3	2	1	3	2	3	2	1	3	3	2	1	3	2	1	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 108869627 (bra-r.6 coexpression data)

Top 50 enrichment test to 108869627 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**