ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bra-r.6	103829117	very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470
bna-r.1	111207841	zinc finger protein 7
ath-u.5	CRK8	cysteine-rich RECEPTOR-like kinase
ghi-r.1	121203494	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
ghi-r.1	121205006	uncharacterized LOC121205006
cit-r.1	102626317	cell division protein FtsZ homolog 2-1, chloroplastic
vvi-u.5	100243076	retrovirus-related Pol polyprotein from transposon RE1
vvi-u.5	100246408	uncharacterized LOC100246408
zma-u.5	103642667	retrovirus-related Pol polyprotein from transposon RE1
zma-u.5	103644180	bZIP transcription factor RISBZ2
tae-r.2	123113213	uncharacterized mitochondrial protein AtMg00810
bdi-r.1	106866887	uncharacterized mitochondrial protein AtMg00810-like
cre-r.1	CHLRE_16g660331v5	uncharacterized protein
cre-r.1	CHLRE_03g183950v5	uncharacterized protein
cre-r.1	CHLRE_03g186800v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_018514448.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl_plas 2, nucl 2, cyto_pero 2, cyto_E.R. 2

(predict for XP_018514448.1)

Subcellular
localization
TargetP

other 8

(predict for XP_018514448.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bra-r.6 for 103829117	bna-r.1 for 111207841	ath-u.5 for CRK8	ghi-r.1 for 121203494	ghi-r.1 for 121205006	cit-r.1 for 102626317	vvi-u.5 for 100243076	vvi-u.5 for 100246408	zma-u.5 for 103642667	zma-u.5 for 103644180	tae-r.2 for 123113213	bdi-r.1 for 106866887	cre-r.1 for CHLRE_16g660331v5	cre-r.1 for CHLRE_03g183950v5	cre-r.1 for CHLRE_03g186800v5

Ortholog

Ortholog ID: 7

Species

bra

bna

ath

ghi

zma

bdi

cre

Symbol

CRK8

Function^*

general transcription and DNA repair factor IIH subunit TFB5

uncharacterized mitochondrial protein AtMg00810-like

cysteine-rich RECEPTOR-like kinase

uncharacterized LOC121205006

bZIP transcription factor RISBZ2

uncharacterized LOC100282400

retrovirus-related Pol polyprotein from transposon TNT 1-94

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03420	Nucleotide excision repair	2
bra00190	Oxidative phosphorylation	2
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2
ghi04075	Plant hormone signal transduction	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00260	Glycine, serine and threonine metabolism	2
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	4

Expression

Expression pattern

Entrez Gene ID^*

103872007

125581568

828415

121205006

103644180

100282400

100822297

66052911

66052920

5728562

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103829117 (bra-r.6 coexpression data)

Top 50 enrichment test to 103829117 (bra-r.6 coexpression data)


Species	bra	bna	ath	ghi	cit	vvi	zma	tae	bdi	cre	gma	sot	ppo	sbi	sly	nta	mtr	osa	hvu
Paralog	1	1	1	2	1	2	2	1	1	3	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103829117 (bra-r.6 coexpression data)

Top 50 enrichment test to 103829117 (bra-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**