ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	541675	tonoplast intrinsic protein 1
zma-u.5	541894	tonoplast intrinsic protein 2
zma-u.5	103646110	aquaporin TIP2-3-like
sbi-r.1	8076232	aquaporin TIP2-1
osa-u.5	4331608	probable aquaporin TIP1-1
osa-u.5	4324276	probable aquaporin TIP4-3
osa-u.5	4324277	probable aquaporin TIP4-2
tae-r.2	123065226	probable aquaporin TIP4-2
tae-r.2	123065225	aquaporin TIP4-4
tae-r.2	123072891	probable aquaporin TIP1-2
hvu-r.1	123407685	probable aquaporin TIP2-2
hvu-r.1	123449894	probable aquaporin TIP4-1
hvu-r.1	123449696	aquaporin TIP1-1
bdi-r.1	100823771	probable aquaporin TIP2-1
bdi-r.1	100843246	probable aquaporin TIP1-2
bdi-r.1	100838472	probable aquaporin TIP4-1
ath-u.5	GAMMA-TIP	gamma tonoplast intrinsic protein
ath-u.5	DELTA-TIP	delta tonoplast integral protein
gma-u.5	100805863	aquaporin TIP3-2
gma-u.5	TIP4-1	aquaporin TIP4-1
sly-u.5	778315	aquaporin-like
sly-u.5	TIP	TIP protein
sly-u.5	TIP2-2	tonoplast intrinsic protein 2.2
bra-r.6	103875293	aquaporin TIP1-2
vvi-u.5	TIP1;2	aquaporin-like
vvi-u.5	100263698	aquaporin TIP1-1
ppo-u.5	7471532	aquaporin TIP4-1
ppo-u.5	7468799	aquaporin TIP1-1
ghi-r.1	107942531	probable aquaporin TIP-type
ghi-r.1	107936442	aquaporin TIP1-3
ghi-r.1	107934072	probable aquaporin TIP-type RB7-5A
bna-r.1	111207223	aquaporin TIP1-2
bna-r.1	106452220	aquaporin TIP2-1
bna-r.1	125608317	aquaporin TIP1-1
sot-r.1	102591890	probable aquaporin TIP1-1
sot-r.1	102603645	aquaporin TIP2-1
sot-r.1	102602512	probable aquaporin TIP3-2
cit-r.1	102611770	aquaporin TIP4-1
cit-r.1	102621052	aquaporin TIP1-3
cit-r.1	102625627	aquaporin TIP3-1-like
nta-r.1	107802859	putative aquaporin TIP-type RB7-18C
nta-r.1	107801866	aquaporin TIP2-1-like
nta-r.1	107794022	aquaporin TIP1-1-like
cre-r.1	CHLRE_12g549300v5	uncharacterized protein

Top 50 coexpressed genes to 541675 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 541675 (zma-u.5 coexpression data)

CoexMap"109280157"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006833 [list] [network] water transport	(15 genes)	IEA
GO:0055085 [list] [network] transmembrane transport	(1100 genes)	IEA

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

GO:0015250 [list] [network] water channel activity

(17 genes)

IEA

Protein

NP_001334625.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 3, cyto 2, plas 2, cyto_plas 2

(predict for NP_001334625.1)

Subcellular
localization
TargetP

other 9, mito 3

(predict for NP_001334625.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 541675	zma-u.5 for 541894	zma-u.5 for 103646110	sbi-r.1 for 8076232	osa-u.5 for 4331608	osa-u.5 for 4324276	osa-u.5 for 4324277	tae-r.2 for 123065226	tae-r.2 for 123065225	tae-r.2 for 123072891	hvu-r.1 for 123407685	hvu-r.1 for 123449894	hvu-r.1 for 123449696	bdi-r.1 for 100823771	bdi-r.1 for 100843246	bdi-r.1 for 100838472	ath-u.5 for GAMMA-TIP	ath-u.5 for DELTA-TIP	gma-u.5 for 100805863	gma-u.5 for TIP4-1	sly-u.5 for 778315	sly-u.5 for TIP	sly-u.5 for TIP2-2	bra-r.6 for 103875293	vvi-u.5 for TIP1;2	vvi-u.5 for 100263698	ppo-u.5 for 7471532	ppo-u.5 for 7468799	ghi-r.1 for 107942531	ghi-r.1 for 107936442	ghi-r.1 for 107934072	bna-r.1 for 111207223	bna-r.1 for 106452220	bna-r.1 for 125608317	sot-r.1 for 102591890	sot-r.1 for 102603645	sot-r.1 for 102602512	cit-r.1 for 102611770	cit-r.1 for 102621052	cit-r.1 for 102625627	nta-r.1 for 107802859	nta-r.1 for 107801866	nta-r.1 for 107794022	cre-r.1 for CHLRE_12g549300v5

Ortholog

Ortholog ID: 83

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

mtr

ghi

bna

sot

cit

nta

cre

Symbol

TIP2;2

TIP2-2

TIP1;2

TIP1;1

Function^*

aquaporin TIP2-3-like

aquaporin TIP4-2-like

aquaporin TIP4-4

aquaporin TIP4-2

probable aquaporin TIP1-1

probable aquaporin TIP3-2

probable aquaporin TIP3-1

aquaporin TIP2-3

probable aquaporin TIP2-2

probable aquaporin TIP4-1

probable aquaporin TIP3-1

probable aquaporin TIP4-1

probable aquaporin TIP4-2

probable aquaporin TIP4-3

gamma tonoplast intrinsic protein

tonoplast intrinsic protein 2;2

aquaporin TIP2-5

aquaporin-like

tonoplast intrinsic protein 2.2

probable aquaporin TIP5-1

probable aquaporin TIP2-2

probable aquaporin TIP3-2

aquaporin-like

aquaporin TIP1-1

aquaporin-like

aquaporin TIP4-1

aquaporin TIP2-1

probable aquaporin TIP-type RB7-5A

probable aquaporin TIP-type

aquaporin TIP1-1

probable aquaporin TIP1-2

aquaporin TIP3-1

aquaporin TIP1-3

probable aquaporin TIP3-2

aquaporin TIP2-1-like

aquaporin TIP1-1

aquaporin TIP4-1

probable aquaporin TIP2-2

aquaporin TIP2-1

aquaporin TIP2-1-like

putative aquaporin TIP-type RB7-18C

putative aquaporin TIP1-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00052	Galactose metabolism	3
tae00561	Glycerolipid metabolism	3
tae00600	Sphingolipid metabolism	3
tae00603	Glycosphingolipid biosynthesis - globo and isoglobo series	3
tae00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00073	Cutin, suberine and wax biosynthesis	2
bdi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	5
bdi00630	Glyoxylate and dicarboxylate metabolism	4
bdi04146	Peroxisome	3
bdi00250	Alanine, aspartate and glutamate metabolism	2
bdi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2
mtr00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot02010	ABC transporters	4
sot00940	Phenylpropanoid biosynthesis	4
sot00910	Nitrogen metabolism	2
sot00620	Pyruvate metabolism	2
sot00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00592	alpha-Linolenic acid metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

103646110

103635714

8078102

8066640

4331608

4336464

4348981

123041819

100037645

123449894

123409954

100838472

100838461

100844557

818255

827446

100805635

778315

101055566

101261595

103868228

103872561

100233004

100263698

100233003

11432805

11435009

11428968

107929356

121216027

121212692

106399493

106426631

102602512

102596615

102589703

102611770

102627157

102624065

107801866

107802889

107830277

5719640

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	ghi	bna	sot	cit	nta	cre	mtr
Paralog	3	1	3	3	3	3	2	2	3	1	2	2	3	3	3	3	3	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 541675 (zma-u.5 coexpression data)

Top 50 enrichment test to 541675 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**