ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100193161	pseudouridylate synthase
osa-u.5	4341760	uncharacterized LOC4341760
ath-u.5	AT5G35400	Pseudouridine synthase family protein
gma-u.5	100789957	tRNA pseudouridine synthase A
sly-u.5	101257579	uncharacterized LOC101257579
vvi-u.5	100242086	uncharacterized LOC100242086
ppo-u.5	18107859	uncharacterized LOC18107859
mtr-u.5	11438456	tRNA pseudouridine synthase A

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_020398637.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, nucl 1, extr 1, cysk 1, golg 1, cysk_nucl 1

(predict for XP_020398637.1)

Subcellular
localization
TargetP

other 8

(predict for XP_020398637.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100193161	osa-u.5 for 4341760	ath-u.5 for AT5G35400	gma-u.5 for 100789957	sly-u.5 for 101257579	vvi-u.5 for 100242086	ppo-u.5 for 18107859	mtr-u.5 for 11438456

Ortholog ID: 10334

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

pseudouridylate synthase

tRNA pseudouridine synthase A

uncharacterized LOC4341760

tRNA pseudouridine synthase A

Pseudouridine synthase family protein

tRNA pseudouridine synthase A

uncharacterized LOC101257579

tRNA pseudouridine synthase A

uncharacterized LOC100242086

uncharacterized LOC18107859

tRNA pseudouridine synthase A

uncharacterized LOC102622951

uncharacterized LOC107832631

uncharacterized LOC107811800

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	11
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2
osa03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00480	Glutathione metabolism	3
hvu01200	Carbon metabolism	3
hvu00030	Pentose phosphate pathway	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3
ath00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3
bra03008	Ribosome biogenesis in eukaryotes	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4
ghi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	5
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3

Expression

Expression pattern

Entrez Gene ID^*

100193161

8061580

4341760

123163813

123407483

100821582

833501

100789957

101257579

103833708

100242086

18107859

11438456

107948450

107899360

106418751

106349789

102592314

102622951

107832631

107811800

66052027

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100193161 (zma-u.5 coexpression data)

Top 50 enrichment test to 100193161 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100193161 (zma-u.5 coexpression data)

Top 50 enrichment test to 100193161 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**