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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   109943116   probable E3 ubiquitin-protein ligase HIP1 
 zma-r.6   109943116   probable E3 ubiquitin-protein ligase HIP1 
 zma-u.5   100281500   uncharacterized LOC100281500 
 zma-u.5   100383211   putative RING zinc finger domain superfamily protein 
 sbi-r.1   8068482   probable E3 ubiquitin-protein ligase HIP1 
 osa-u.5   9272591   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123054931   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123190785   probable E3 ubiquitin-protein ligase HIP1 
 tae-r.2   123047118   probable E3 ubiquitin-protein ligase HIP1 
 hvu-r.1   123428152   probable E3 ubiquitin-protein ligase HIP1 
 bdi-r.1   100835376   probable E3 ubiquitin-protein ligase HIP1 
 ath-u.5   MBR1   RING/U-box superfamily protein 
 ath-u.5   MBR2   RING/U-box superfamily protein 
 ath-u.5   AT5G42940   RING/U-box superfamily protein 
 gma-u.5   100783014   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100784575   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100791026   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101252535   E3 ubiquitin-protein ligase MBR2 
 sly-u.5   101260877   E3 ubiquitin-protein ligase MBR2 
 sly-u.5   101261170   E3 ubiquitin-protein ligase MBR2-like 
 bra-r.6   103844361   E3 ubiquitin-protein ligase MBR1 
 bra-r.6   103828003   probable E3 ubiquitin-protein ligase RHG1A 
 vvi-u.5   100267740   probable E3 ubiquitin-protein ligase RHG1A 
 vvi-u.5   100258840   E3 ubiquitin-protein ligase MBR2 
 ppo-u.5   7490042   E3 ubiquitin-protein ligase MBR2 
 ppo-u.5   7462870   probable E3 ubiquitin-protein ligase RHG1A 
 ppo-u.5   7465027   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11414526   probable E3 ubiquitin-protein ligase RHG1A 
 mtr-u.5   11446940   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107941534   probable E3 ubiquitin-protein ligase RHG1A 
 ghi-r.1   107943852   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107940793   probable E3 ubiquitin-protein ligase RHG1A 
 bna-r.1   125577881   probable E3 ubiquitin-protein ligase RHG1A 
 bna-r.1   106446819   E3 ubiquitin-protein ligase MBR1 
 bna-r.1   106445641   E3 ubiquitin-protein ligase MBR1 
 sot-r.1   102596025   E3 ubiquitin-protein ligase MBR2-like 
 sot-r.1   107058063   E3 ubiquitin-protein ligase MBR2-like 
 sot-r.1   102590676   probable E3 ubiquitin-protein ligase HIP1 
 cit-r.1   102620199   E3 ubiquitin-protein ligase MBR2-like 
 cit-r.1   102620487   E3 ubiquitin-protein ligase MBR2-like 
 cit-r.1   102629270   probable E3 ubiquitin-protein ligase RHG1A 
 nta-r.1   107797011   putative E3 ubiquitin-protein ligase RHG1A 
 nta-r.1   107815888   putative E3 ubiquitin-protein ligase RHG1A 
 nta-r.1   107765500   E3 ubiquitin-protein ligase MBR2 

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Top 50 coexpressed genes to 109943116 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109943116 (zma-u.5 coexpression data)

CoexMap"109943116"


zmaLOC109943116 | Entrez gene ID : 109943116    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 3 1 1 3 3 3 2 2 3 2 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (251 genes)  IEA  
Protein XP_020401533.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  extr 2,  vacu 1,  nucl 1,  plas 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_020401533.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_020401533.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
109943116
zma-r.6
for
109943116
zma-u.5
for
100281500
zma-u.5
for
100383211
sbi-r.1
for
8068482
osa-u.5
for
9272591
tae-r.2
for
123054931
tae-r.2
for
123190785
tae-r.2
for
123047118
hvu-r.1
for
123428152
bdi-r.1
for
100835376
ath-u.5
for
MBR1
ath-u.5
for
MBR2
ath-u.5
for
AT5G42940
gma-u.5
for
100783014
gma-u.5
for
100784575
gma-u.5
for
100791026
sly-u.5
for
101252535
sly-u.5
for
101260877
sly-u.5
for
101261170
bra-r.6
for
103844361
bra-r.6
for
103828003
vvi-u.5
for
100267740
vvi-u.5
for
100258840
ppo-u.5
for
7490042
ppo-u.5
for
7462870
ppo-u.5
for
7465027
mtr-u.5
for
11414526
mtr-u.5
for
11446940
ghi-r.1
for
107941534
ghi-r.1
for
107943852
ghi-r.1
for
107940793
bna-r.1
for
125577881
bna-r.1
for
106446819
bna-r.1
for
106445641
sot-r.1
for
102596025
sot-r.1
for
107058063
sot-r.1
for
102590676
cit-r.1
for
102620199
cit-r.1
for
102620487
cit-r.1
for
102629270
nta-r.1
for
107797011
nta-r.1
for
107815888
nta-r.1
for
107765500


Ortholog ID: 1370
Species zma zma zma sbi osa tae tae tae hvu bdi ath ath ath gma gma gma sly sly sly bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna sot sot sot cit cit cit nta nta nta
Symbol LOC109943116 LOC100281500 LOC100383211 LOC8068482 LOC9272591 LOC123054931 LOC123190785 LOC123047118 LOC123428152 LOC100835376 MBR2 AT5G42940 AT1G45180 LOC100783014 LOC100809024 LOC100820322 LOC101260877 LOC101262398 LOC101249818 LOC103844361 LOC103828003 LOC100267740 LOC100258840 LOC7490042 LOC7462870 LOC7465027 LOC11414526 LOC11446940 LOC107938056 LOC107894280 LOC121217803 LOC106371878 LOC102587478 LOC102587147 LOC102580028 LOC102620199 LOC102620487 LOC102629270 LOC107797011 LOC107767353 LOC107768864
Function* probable E3 ubiquitin-protein ligase HIP1 uncharacterized LOC100281500 putative RING zinc finger domain superfamily protein probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR1 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like probable E3 ubiquitin-protein ligase RHG1A putative E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 putative E3 ubiquitin-protein ligase RHG1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00920 Sulfur metabolism 3
tae01320 Sulfur cycle 3
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 4
tae01320 Sulfur cycle 4
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00670 One carbon pool by folate 2
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109943116 100281500 100383211 8068482 9272591 123054931 123190785 123047118 123428152 100835376 829550 834306 841086 100783014 100809024 100820322 101260877 101262398 101249818 103844361 103828003 100267740 100258840 7490042 7462870 7465027 11414526 11446940 107938056 107894280 121217803 106371878 102587478 102587147 102580028 102620199 102620487 102629270 107797011 107767353 107768864
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