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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110431000   dehydrodolichyl diphosphate synthase 6 
 zma-u.5   100193048   uncharacterized LOC100193048 
 osa-u.5   4340251   dehydrodolichyl diphosphate synthase CPT3 
 osa-u.5   4343863   dehydrodolichyl diphosphate synthase CPT3 
 ath-u.5   cPT1   Undecaprenyl pyrophosphate synthetase family protein 
 gma-u.5   100812145   uncharacterized LOC100812145 
 gma-u.5   100775552   rubber cis-polyprenyltransferase HRT2 
 gma-u.5   100794720   dehydrodolichyl diphosphate synthase CPT3 
 sly-u.5   CPT3   cis-prenyltransferase 3 
 ppo-u.5   18099099   dehydrodolichyl diphosphate synthase 6 
 mtr-u.5   11418409   dehydrodolichyl diphosphate synthase CPT3 
 mtr-u.5   11445331   dehydrodolichyl diphosphate synthase CPT3 

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Top 50 coexpressed genes to 110431000 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110431000 (sbi-r.1 coexpression data)

CoexMap"110431000"


sbiLOC110431000 | Entrez gene ID : 110431000    
Species sbi zma osa ath gma sly ppo mtr bra nta cre vvi cit hvu bdi sot tae bna ghi
Paralog 1 1 2 1 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi00900 [list] [network] Terpenoid backbone biosynthesis (59 genes)
GO BP
GO:0016094 [list] [network] polyprenol biosynthetic process  (5 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (492 genes)  IEA  
GO MF
Protein XP_021305101.1 [sequence] [blastp]
XP_021305102.1 [sequence] [blastp]
XP_021305103.1 [sequence] [blastp]
XP_021305104.1 [sequence] [blastp]
XP_021305105.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 1,  mito 1,  cysk_nucl 1  (predict for XP_021305101.1)
chlo 4,  nucl 2,  cyto 1,  mito 1,  cysk_nucl 1  (predict for XP_021305102.1)
chlo 4,  nucl 2,  cyto 1,  mito 1,  cysk_nucl 1  (predict for XP_021305103.1)
chlo 4,  nucl 2,  cyto 1,  mito 1,  cysk_nucl 1  (predict for XP_021305104.1)
chlo 4,  nucl 2,  cyto 1,  mito 1,  cysk_nucl 1  (predict for XP_021305105.1)
Subcellular
localization
TargetP
other 7,  chlo 7  (predict for XP_021305101.1)
other 7,  chlo 7  (predict for XP_021305102.1)
other 7,  chlo 7  (predict for XP_021305103.1)
other 7,  chlo 7  (predict for XP_021305104.1)
other 7,  chlo 7  (predict for XP_021305105.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110431000

.
zma-u.5
for
100193048

.
osa-u.5
for
4340251

.
osa-u.5
for
4343863

.
ath-u.5
for
cPT1

.
gma-u.5
for
100812145

.
gma-u.5
for
100775552

.
gma-u.5
for
100794720

.
sly-u.5
for
CPT3

.
ppo-u.5
for
18099099

.
mtr-u.5
for
11418409

.
mtr-u.5
for
11445331

.


Ortholog ID: 2786
Species gma gma sly osa osa zma bra ppo mtr mtr tae tae hvu ghi bna cre sbi sot cit bdi bdi nta
Symbol LOC100794720 LOC100812145 CPT3 LOC4340251 LOC4343863 LOC100193048 LOC103874115 LOC18099099 LOC11418409 LOC11445331 LOC123178000 LOC123150652 LOC123410936 LOC107951372 LOC106380566 CHLRE_06g263289v5 LOC110431000 LOC102601739 LOC102610116 LOC100845573 LOC100830261 LOC107814919
Function* dehydrodolichyl diphosphate synthase CPT3 uncharacterized LOC100812145 cis-prenyltransferase 3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 uncharacterized LOC100193048 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase CPT3 dehydrodolichyl diphosphate synthase 6 uncharacterized protein dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase 6-like dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase 6 dehydrodolichyl diphosphate synthase CPT3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma00190 Oxidative phosphorylation 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 3
osa01240 Biosynthesis of cofactors 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 6
mtr04016 MAPK signaling pathway - plant 3
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04712 Circadian rhythm - plant 2
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 3
hvu00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 2
cre00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 4
sbi01240 Biosynthesis of cofactors 4
sbi00561 Glycerolipid metabolism 3
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 4
nta00020 Citrate cycle (TCA cycle) 4
nta00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100794720 100812145 101253666 4340251 4343863 100193048 103874115 18099099 11418409 11445331 123178000 123150652 123410936 107951372 106380566 5721996 110431000 102601739 102610116 100845573 100830261 107814919
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