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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110434201   pentatricopeptide repeat-containing protein At3g46870 
 zma-u.5   542158   thylakoid assembly 8 
 osa-u.5   4324089   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 ath-u.5   EMB3123   PPR containing protein 
 gma-u.5   100799612   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 gma-u.5   100788379   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 sly-u.5   101267975   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 vvi-u.5   100251441   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 ppo-u.5   7483539   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 mtr-u.5   11435008   protein THYLAKOID ASSEMBLY 8, chloroplastic 

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Top 50 coexpressed genes to 110434201 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110434201 (sbi-r.1 coexpression data)

CoexMap"110434201"


sbiLOC110434201 | Entrez gene ID : 110434201    
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000373 [list] [network] Group II intron splicing  (7 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (71 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021313686.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_021313686.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_021313686.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110434201

.
zma-u.5
for
542158

.
osa-u.5
for
4324089

.
ath-u.5
for
EMB3123

.
gma-u.5
for
100799612

.
gma-u.5
for
100788379

.
sly-u.5
for
101267975

.
vvi-u.5
for
100251441

.
ppo-u.5
for
7483539

.
mtr-u.5
for
11435008

.


Ortholog ID: 9515
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB3123 LOC100799612 LOC100788379 LOC101267975 LOC4324089 LOC542158 LOC103863790 LOC100251441 LOC7483539 LOC11435008 LOC123065098 LOC123077667 LOC123439584 LOC107897493 LOC107914440 LOC106429457 LOC125607898 LOC110434201 LOC107059800 LOC102622003 LOC100823749 LOC107790898 LOC107782999
Function* PPR containing protein protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic thylakoid assembly 8 protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic-like protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic-like pentatricopeptide repeat-containing protein At3g46870 uncharacterized LOC107059800 hypothetical protein protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic-like protein THYLAKOID ASSEMBLY 8, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822397 100799612 100788379 101267975 4324089 542158 103863790 100251441 7483539 11435008 123065098 123077667 123439584 107897493 107914440 106429457 125607898 110434201 107059800 102622003 100823749 107790898 107782999
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