ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103653943	probable xyloglucan endotransglucosylase/hydrolase protein 30
zma-u.5	103635502	serine-rich adhesin for platelets
zma-u.5	103642667	retrovirus-related Pol polyprotein from transposon RE1
tae-r.2	123113213	uncharacterized mitochondrial protein AtMg00810
bdi-r.1	106866887	uncharacterized mitochondrial protein AtMg00810-like
ath-u.5	CRK8	cysteine-rich RECEPTOR-like kinase
bra-r.6	103837662	thiosulfate sulfurtransferase 16, chloroplastic
bra-r.6	103832953	ras-related protein RABG3e
vvi-u.5	109122214	retrovirus-related Pol polyprotein from transposon RE2
ghi-r.1	121203494	leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3
ghi-r.1	121205006	uncharacterized LOC121205006
bna-r.1	111207841	zinc finger protein 7
cit-r.1	102626317	cell division protein FtsZ homolog 2-1, chloroplastic
cre-r.1	CHLRE_16g660331v5	uncharacterized protein
cre-r.1	CHLRE_03g183950v5	uncharacterized protein
cre-r.1	CHLRE_03g186800v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0015074 [list] [network] DNA integration

(61 genes)

IEA

GO CC

GO MF

GO:0003676 [list] [network] nucleic acid binding

(3505 genes)

IEA

Protein

XP_021317657.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, pero 2, nucl 1

(predict for XP_021317657.1)

Subcellular
localization
TargetP

other 6, mito 4

(predict for XP_021317657.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103653943	zma-u.5 for 103635502	zma-u.5 for 103642667	tae-r.2 for 123113213	bdi-r.1 for 106866887	ath-u.5 for CRK8	bra-r.6 for 103837662	bra-r.6 for 103832953	vvi-u.5 for 109122214	ghi-r.1 for 121203494	ghi-r.1 for 121205006	bna-r.1 for 111207841	cit-r.1 for 102626317	cre-r.1 for CHLRE_16g660331v5	cre-r.1 for CHLRE_03g183950v5	cre-r.1 for CHLRE_03g186800v5

Ortholog

Ortholog ID: 7

Species

zma

bdi

ath

bra

ghi

bna

cre

Symbol

CRK8

Function^*

bZIP transcription factor RISBZ2

uncharacterized LOC100282400

retrovirus-related Pol polyprotein from transposon TNT 1-94

cysteine-rich RECEPTOR-like kinase

general transcription and DNA repair factor IIH subunit TFB5

uncharacterized LOC121205006

uncharacterized mitochondrial protein AtMg00810-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00260	Glycine, serine and threonine metabolism	2
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03420	Nucleotide excision repair	2
bra00190	Oxidative phosphorylation	2
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2
ghi04075	Plant hormone signal transduction	2
ghi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

103644180

100282400

100822297

828415

103872007

121205006

125581568

66052911

66052920

5728562

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103653943 (zma-u.5 coexpression data)

Top 50 enrichment test to 103653943 (zma-u.5 coexpression data)


Species	zma	tae	bdi	ath	bra	vvi	ghi	bna	cit	cre	gma	sot	ppo	sbi	sly	nta	mtr	osa	hvu
Paralog	3	1	1	1	2	1	2	1	1	3	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103653943 (zma-u.5 coexpression data)

Top 50 enrichment test to 103653943 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**