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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110436552   E3 ubiquitin-protein ligase At1g12760-like 
 zma-u.5   100191292   uncharacterized LOC100191292 
 zma-u.5   100284889   protein binding protein 
 zma-u.5   100284185   uncharacterized LOC100284185 
 osa-u.5   4330296   E3 ubiquitin-protein ligase At1g12760 
 osa-u.5   4343169   E3 ubiquitin-protein ligase At1g12760 
 ath-u.5   AT3G61180   RING/U-box superfamily protein 
 ath-u.5   AT4G11680   Zinc finger, C3HC4 type (RING finger) family protein 
 ath-u.5   AT1G12760   Zinc finger, C3HC4 type (RING finger) family protein 
 gma-u.5   102670411   E3 ubiquitin-protein ligase At1g63170-like 
 gma-u.5   100776124   E3 ubiquitin-protein ligase At1g12760 
 gma-u.5   100779757   E3 ubiquitin-protein ligase At1g12760 
 sly-u.5   101263708   E3 ubiquitin-protein ligase At1g63170 
 sly-u.5   101258191   E3 ubiquitin-protein ligase At1g12760 
 vvi-u.5   100243778   E3 ubiquitin-protein ligase At1g12760 
 vvi-u.5   100251339   E3 ubiquitin-protein ligase At1g12760 
 ppo-u.5   7465844   E3 ubiquitin-protein ligase At1g12760 
 ppo-u.5   7461748   E3 ubiquitin-protein ligase At1g63170 
 ppo-u.5   7464889   E3 ubiquitin-protein ligase At1g63170 
 mtr-u.5   11441007   E3 ubiquitin-protein ligase At1g12760 
 mtr-u.5   25493663   E3 ubiquitin-protein ligase At1g12760 
 mtr-u.5   11423485   E3 ubiquitin-protein ligase At1g63170 

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Top 50 coexpressed genes to 110436552 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110436552 (sbi-r.1 coexpression data)

CoexMap"110436552"


sbiLOC110436552 | Entrez gene ID : 110436552    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 2 3 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_021319510.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 2,  chlo 1,  nucl 1,  extr 1  (predict for XP_021319510.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_021319510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110436552

.
zma-u.5
for
100191292

.
zma-u.5
for
100284889

.
zma-u.5
for
100284185

.
osa-u.5
for
4330296

.
osa-u.5
for
4343169

.
ath-u.5
for
AT3G61180

.
ath-u.5
for
AT4G11680

.
ath-u.5
for
AT1G12760

.
gma-u.5
for
102670411

.
gma-u.5
for
100776124

.
gma-u.5
for
100779757

.
sly-u.5
for
101263708

.
sly-u.5
for
101258191

.
vvi-u.5
for
100243778

.
vvi-u.5
for
100251339

.
ppo-u.5
for
7465844

.
ppo-u.5
for
7461748

.
ppo-u.5
for
7464889

.
mtr-u.5
for
11441007

.
mtr-u.5
for
25493663

.
mtr-u.5
for
11423485

.


Ortholog ID: 1319
Species ath ath gma gma sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G63170 AT4G11680 LOC100785943 LOC100795425 LOC101263708 LOC4330296 LOC100284185 LOC103647287 LOC103249158 LOC103843105 LOC100243778 LOC100251339 LOC7461748 LOC7465844 LOC11441007 LOC25493663 LOC123190037 LOC123054144 LOC123402345 LOC123427477 LOC107957260 LOC107924788 LOC106410766 LOC106412558 LOC8059768 LOC110436552 LOC102586651 LOC102586579 LOC127900992 LOC102617680 LOC100842859 LOC100842139 LOC107799834 LOC107808687
Function* Zinc finger, C3HC4 type (RING finger) family protein Zinc finger, C3HC4 type (RING finger) family protein E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 uncharacterized LOC100284185 E3 ubiquitin-protein ligase E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At4g11680 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g12760 E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g12760-like E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170 E3 ubiquitin-protein ligase At1g63170-like E3 ubiquitin-protein ligase At1g63170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00062 Fatty acid elongation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi03272 Virion - Hepatitis viruses 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01212 Fatty acid metabolism 3
mtr00061 Fatty acid biosynthesis 2
mtr00620 Pyruvate metabolism 2
mtr00640 Propanoate metabolism 2
mtr00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 3
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 4
nta00591 Linoleic acid metabolism 2
nta00071 Fatty acid degradation 2
nta00410 beta-Alanine metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta00280 Valine, leucine and isoleucine degradation 3
nta00350 Tyrosine metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842621 826773 100785943 100795425 101263708 4330296 100284185 103647287 103249158 103843105 100243778 100251339 7461748 7465844 11441007 25493663 123190037 123054144 123402345 123427477 107957260 107924788 106410766 106412558 8059768 110436552 102586651 102586579 127900992 102617680 100842859 100842139 107799834 107808687
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