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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110437409   SKP1-like protein 21 
 zma-u.5   103639617   SKP1-like protein 21 
 zma-u.5   100281615   uncharacterized LOC100281615 
 zma-u.5   100304273   SKP1-like protein 21 
 osa-u.5   4331327   SKP1-like protein 21 
 ath-u.5   SK20   SKP1-like 20 
 ath-u.5   SK21   SKP1-like 21 
 gma-u.5   100782740   SKP1-like protein 21 
 gma-u.5   100775387   SKP1-like protein 21 
 gma-u.5   100794666   SKP1-like protein 21 
 sly-u.5   101263913   SKP1-like protein 21 
 sly-u.5   101257146   SKP1-like protein 21 
 vvi-u.5   100265362   SKP1-like protein 21 
 vvi-u.5   100247347   SKP1-like protein 21 
 ppo-u.5   7496974   SKP1-like protein 21 
 ppo-u.5   7454522   SKP1-like protein 21 
 ppo-u.5   7457345   SKP1-like protein 21 
 mtr-u.5   25496528   SKP1-like protein 21 
 mtr-u.5   11445956   SKP1-like protein 21 
 mtr-u.5   11437860   SKP1-like protein 21 

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Top 50 coexpressed genes to 110437409 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110437409 (sbi-r.1 coexpression data)

CoexMap"110437409"


sbiLOC110437409 | Entrez gene ID : 110437409    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 1 2 3 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (59 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (18 genes)  IEA  
Protein XP_021321564.1 [sequence] [blastp]
XP_021321565.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cysk 1,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_021321564.1)
cyto 6,  cysk 1,  chlo 1,  nucl 1,  mito 1,  chlo_mito 1,  cysk_plas 1  (predict for XP_021321565.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for XP_021321564.1)
other 8,  scret 3  (predict for XP_021321565.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110437409

.
zma-u.5
for
103639617

.
zma-u.5
for
100281615

.
zma-u.5
for
100304273

.
osa-u.5
for
4331327

.
ath-u.5
for
SK20

.
ath-u.5
for
SK21

.
gma-u.5
for
100782740

.
gma-u.5
for
100775387

.
gma-u.5
for
100794666

.
sly-u.5
for
101263913

.
sly-u.5
for
101257146

.
vvi-u.5
for
100265362

.
vvi-u.5
for
100247347

.
ppo-u.5
for
7496974

.
ppo-u.5
for
7454522

.
ppo-u.5
for
7457345

.
mtr-u.5
for
25496528

.
mtr-u.5
for
11445956

.
mtr-u.5
for
11437860

.


Ortholog ID: 3095
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta nta
Symbol SK20 SK21 LOC100785953 LOC100794666 LOC101263913 LOC101257146 LOC4331327 LOC100281615 LOC103639617 LOC103830295 LOC103866935 LOC100247347 LOC100265362 LOC7496974 LOC7454522 LOC11437860 LOC11445956 LOC123093864 LOC123099088 LOC123449944 LOC107924835 LOC107911525 LOC106412032 LOC106411796 LOC110437409 LOC8081481 LOC102598921 LOC102578338 LOC102620512 LOC102627808 LOC100837314 LOC107832085 LOC107820068
Function* SKP1-like 20 SKP1-like 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 uncharacterized LOC100281615 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 20 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21 SKP1-like protein 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae00970 Aminoacyl-tRNA biosynthesis 4
tae04120 Ubiquitin mediated proteolysis 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00740 Riboflavin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819203 825314 100785953 100794666 101263913 101257146 4331327 100281615 103639617 103830295 103866935 100247347 100265362 7496974 7454522 11437860 11445956 123093864 123099088 123449944 107924835 107911525 106412032 106411796 110437409 8081481 102598921 102578338 102620512 102627808 100837314 107832085 107820068
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