ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	111202315	protein NRT1/ PTR FAMILY 2.10
bna-r.1	106424883	protein NRT1/ PTR FAMILY 2.11-like
bna-r.1	106397267	protein NRT1/ PTR FAMILY 2.10-like
bna-r.1	106384518	protein NRT1/ PTR FAMILY 2.10-like
bra-r.6	103835876	protein NRT1/ PTR FAMILY 2.9
bra-r.6	103837423	protein NRT1/ PTR FAMILY 2.11
bra-r.6	103837490	protein NRT1/ PTR FAMILY 2.11
ath-u.5	GTR1	Major facilitator superfamily protein
ath-u.5	GTR2	Major facilitator superfamily protein
ath-u.5	NRT1.9	Major facilitator superfamily protein
ghi-r.1	107946491	protein NRT1/ PTR FAMILY 2.11
ghi-r.1	107939854	protein NRT1/ PTR FAMILY 2.11
ghi-r.1	107950096	protein NRT1/ PTR FAMILY 2.9
cit-r.1	102610685	protein NRT1/ PTR FAMILY 2.9
cit-r.1	102610070	protein NRT1/ PTR FAMILY 2.11-like
gma-u.5	547473	protein NRT1/ PTR FAMILY 2.11
gma-u.5	NRT1-2	nitrate transporter NRT1-2
gma-u.5	100798182	protein NRT1/ PTR FAMILY 2.9
vvi-u.5	100258695	protein NRT1/ PTR FAMILY 2.11
vvi-u.5	109124329	protein NRT1/ PTR FAMILY 2.11
vvi-u.5	100244038	protein NRT1/ PTR FAMILY 2.11
ppo-u.5	7483447	protein NRT1/ PTR FAMILY 2.11
ppo-u.5	7487840	protein NRT1/ PTR FAMILY 2.9
ppo-u.5	18107290	protein NRT1/ PTR FAMILY 2.10
mtr-u.5	25493806	protein NRT1/ PTR FAMILY 2.9
mtr-u.5	25493804	protein NRT1/ PTR FAMILY 2.9
sly-u.5	101258964	protein NRT1/ PTR FAMILY 2.9-like
sly-u.5	101267393	protein NRT1/ PTR FAMILY 2.11
sly-u.5	101267693	protein NRT1/ PTR FAMILY 2.11-like
sot-r.1	102604766	protein NRT1/ PTR FAMILY 2.10-like
sot-r.1	102579205	protein NRT1/ PTR FAMILY 2.11-like
sot-r.1	102579529	protein NRT1/ PTR FAMILY 2.11-like
nta-r.1	107775062	protein NRT1/ PTR FAMILY 2.11
nta-r.1	107765798	protein NRT1/ PTR FAMILY 2.11
nta-r.1	107825213	protein NRT1/ PTR FAMILY 2.11-like
osa-u.5	4352906	protein NRT1/ PTR FAMILY 2.11
zma-u.5	100191455	uncharacterized LOC100191455
zma-u.5	100191680	Protein NRT1/ PTR FAMILY 2.9
zma-u.5	100281425	uncharacterized LOC100281425
tae-r.2	123087250	protein NRT1/ PTR FAMILY 2.11
tae-r.2	123090711	protein NRT1/ PTR FAMILY 2.11
tae-r.2	123119335	protein NRT1/ PTR FAMILY 2.11
hvu-r.1	123447183	protein NRT1/ PTR FAMILY 2.11-like
hvu-r.1	123399008	protein NRT1/ PTR FAMILY 2.11-like
sbi-r.1	8054157	protein NRT1/ PTR FAMILY 2.11
sbi-r.1	8065254	protein NRT1/ PTR FAMILY 2.9
bdi-r.1	100843012	protein NRT1/ PTR FAMILY 2.11
bdi-r.1	100827725	protein NRT1/ PTR FAMILY 2.9

Top 50 coexpressed genes to 111202315 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 111202315 (bna-r.1 coexpression data)

CoexMap"111202315"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(2900 genes)

IEA

GO CC

GO:0005886 [list] [network] plasma membrane

(2955 genes)

IEA

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(3686 genes)

IEA

Protein

XP_022550736.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 2, cyto 1, pero 1, cyto_pero 1

(predict for XP_022550736.1)

Subcellular
localization
TargetP

other 9

(predict for XP_022550736.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 111202315	bna-r.1 for 106424883	bna-r.1 for 106397267	bna-r.1 for 106384518	bra-r.6 for 103835876	bra-r.6 for 103837423	bra-r.6 for 103837490	ath-u.5 for GTR1	ath-u.5 for GTR2	ath-u.5 for NRT1.9	ghi-r.1 for 107946491	ghi-r.1 for 107939854	ghi-r.1 for 107950096	cit-r.1 for 102610685	cit-r.1 for 102610070	gma-u.5 for 547473	gma-u.5 for NRT1-2	gma-u.5 for 100798182	vvi-u.5 for 100258695	vvi-u.5 for 109124329	vvi-u.5 for 100244038	ppo-u.5 for 7483447	ppo-u.5 for 7487840	ppo-u.5 for 18107290	mtr-u.5 for 25493806	mtr-u.5 for 25493804	sly-u.5 for 101258964	sly-u.5 for 101267393	sly-u.5 for 101267693	sot-r.1 for 102604766	sot-r.1 for 102579205	sot-r.1 for 102579529	nta-r.1 for 107775062	nta-r.1 for 107765798	nta-r.1 for 107825213	osa-u.5 for 4352906	zma-u.5 for 100191455	zma-u.5 for 100191680	zma-u.5 for 100281425	tae-r.2 for 123087250	tae-r.2 for 123090711	tae-r.2 for 123119335	hvu-r.1 for 123447183	hvu-r.1 for 123399008	sbi-r.1 for 8054157	sbi-r.1 for 8065254	bdi-r.1 for 100843012	bdi-r.1 for 100827725

Ortholog

Ortholog ID: 867

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GTR1

GTR2

NRT1.9

Function^*

protein NRT1/ PTR FAMILY 2.10

protein NRT1/ PTR FAMILY 2.10-like

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.10

Major facilitator superfamily protein

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.9

protein NRT1/ PTR FAMILY 2.11-like

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.9

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.9

protein NRT1/ PTR FAMILY 2.9-like

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.11-like

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.11-like

protein NRT1/ PTR FAMILY 2.11

uncharacterized LOC100191455

Protein NRT1/ PTR FAMILY 2.9

uncharacterized LOC100281425

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.11-like

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.9

protein NRT1/ PTR FAMILY 2.11

protein NRT1/ PTR FAMILY 2.9

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra04141	Protein processing in endoplasmic reticulum	2
bra04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	7
ath00592	alpha-Linolenic acid metabolism	4
ath00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00270	Cysteine and methionine metabolism	2
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00770	Pantothenate and CoA biosynthesis	2
ghi00966	Glucosinolate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04146	Peroxisome	2
cit00230	Purine metabolism	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00062	Fatty acid elongation	3
gma04626	Plant-pathogen interaction	3
gma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2
mtr04136	Autophagy - other	2
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	4
mtr00902	Monoterpenoid biosynthesis	3
mtr04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	6
zma01240	Biosynthesis of cofactors	2
zma00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3
zma04145	Phagosome	3
zma04517	IgSF CAM signaling	3
zma04814	Motor proteins	3
zma00062	Fatty acid elongation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	4
tae00051	Fructose and mannose metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae01250	Biosynthesis of nucleotide sugars	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	5
bdi01230	Biosynthesis of amino acids	5
bdi00670	One carbon pool by folate	3
bdi01240	Biosynthesis of cofactors	3
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

111202315

106410496

106414122

103837490

103874075

103873558

823951

836389

838469

107946491

107939854

107950096

102610685

102610070

547473

100801102

100814170

100258695

100244038

100263850

7483447

7487840

25493806

25493804

101258964

101267393

101267693

102579205

102579529

102590867

107765798

107825213

4352906

4352905

100191455

100191680

100281425

123090711

123399008

8054157

8086108

100843012

100827725

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	2	3	3	3	2	3	3	3	1	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 111202315 (bna-r.1 coexpression data)

Top 50 enrichment test to 111202315 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**