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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111204593   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 bna-r.1   106439803   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 bra-r.6   103860316   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 ath-u.5   EMB2761   threonyl-tRNA synthetase, putative / threonine-tRNA ligase 
 ghi-r.1   107952800   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 ghi-r.1   107954671   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 cit-r.1   102618874   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 gma-u.5   100784904   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 vvi-u.5   100256277   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 ppo-u.5   7455977   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 mtr-u.5   11437353   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 sly-u.5   101249471   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 sot-r.1   102600652   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 nta-r.1   107792707   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 nta-r.1   107788827   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 osa-u.5   4329580   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 zma-u.5   109940924   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 tae-r.2   123145308   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 hvu-r.1   123401941   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 sbi-r.1   8058371   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 bdi-r.1   100841537   threonine--tRNA ligase, chloroplastic/mitochondrial 2 
 cre-r.1   CHLRE_10g421600v5   uncharacterized protein 

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Top 50 coexpressed genes to 111204593 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111204593 (bna-r.1 coexpression data)

CoexMap"111204593"


bnaLOC111204593 | Entrez gene ID : 111204593    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00970 [list] [network] Aminoacyl-tRNA biosynthesis (226 genes)
GO BP
GO:0006435 [list] [network] threonyl-tRNA aminoacylation  (9 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (365 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (1831 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0004829 [list] [network] threonine-tRNA ligase activity  (9 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_022555410.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_022555410.1)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_022555410.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111204593
bna-r.1
for
106439803
bra-r.6
for
103860316
ath-u.5
for
EMB2761
ghi-r.1
for
107952800
ghi-r.1
for
107954671
cit-r.1
for
102618874
gma-u.5
for
100784904
vvi-u.5
for
100256277
ppo-u.5
for
7455977
mtr-u.5
for
11437353
sly-u.5
for
101249471
sot-r.1
for
102600652
nta-r.1
for
107792707
nta-r.1
for
107788827
osa-u.5
for
4329580
zma-u.5
for
109940924
tae-r.2
for
123145308
hvu-r.1
for
123401941
sbi-r.1
for
8058371
bdi-r.1
for
100841537
cre-r.1
for
CHLRE_10g421600v5


Ortholog ID: 11232
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi cre
Symbol LOC111204593 LOC106439803 LOC103860316 EMB2761 LOC107952800 LOC107954671 LOC102618874 LOC100784904 LOC100256277 LOC7455977 LOC11437353 LOC101249471 LOC102600652 LOC107792707 LOC107788827 LOC4329580 LOC109940924 LOC123145308 LOC123401941 LOC8058371 LOC100841537 CHLRE_10g421600v5
Function* threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonyl-tRNA synthetase, putative / threonine-tRNA ligase threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 threonine--tRNA ligase, chloroplastic/mitochondrial 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00920 Sulfur metabolism 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00620 Pyruvate metabolism 2
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00630 Glyoxylate and dicarboxylate metabolism 3
vvi01200 Carbon metabolism 3
vvi00860 Porphyrin metabolism 2
vvi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00052 Galactose metabolism 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00260 Glycine, serine and threonine metabolism 2
bdi01200 Carbon metabolism 2
bdi00906 Carotenoid biosynthesis 2
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 8
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111204593 106439803 103860316 815029 107952800 107954671 102618874 100784904 100256277 7455977 11437353 101249471 102600652 107792707 107788827 4329580 109940924 123145308 123401941 8058371 100841537 5728261
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