ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	111205233	uncharacterized LOC111205233
bna-r.1	125584364	uncharacterized LOC125584364
bna-r.1	111214157	INO80 complex subunit B-like
bna-r.1	111213905	uncharacterized LOC111213905
bra-r.6	103849764	INO80 complex subunit B
bra-r.6	103859174	INO80 complex subunit B
bra-r.6	103866388	hepatoma-derived growth factor-related protein 2
ath-u.5	AT2G47350	HIT zinc finger and PAPA-1-like domain-containing protein
ath-u.5	AT3G06660	PAPA-1-like family protein / zinc finger (HIT type) family protein
ath-u.5	AT1G56460	HIT zinc finger and PAPA-1-like domain-containing protein
ghi-r.1	107908498	uncharacterized LOC107908498
ghi-r.1	107909999	triadin
ghi-r.1	107938649	uncharacterized LOC107938649
cit-r.1	102624196	uncharacterized LOC102624196
cit-r.1	102621326	uncharacterized LOC102621326
cit-r.1	102607806	uncharacterized LOC102607806
gma-u.5	100793005	calponin homology domain-containing protein DDB_G0272472
gma-u.5	100814323	calponin homology domain-containing protein DDB_G0272472
vvi-u.5	100246939	uncharacterized LOC100246939
vvi-u.5	100261960	uncharacterized LOC100261960
ppo-u.5	7455424	uncharacterized LOC7455424
ppo-u.5	7460463	uncharacterized LOC7460463
ppo-u.5	7471108	uncharacterized LOC7471108
mtr-u.5	112416763	myb-like protein V
mtr-u.5	112421058	uncharacterized LOC112421058
sly-u.5	101249962	actin cytoskeleton-regulatory complex protein PAN1
sly-u.5	101265365	uncharacterized LOC101265365
sot-r.1	102597315	uncharacterized LOC102597315
sot-r.1	102579727	uncharacterized LOC102579727
nta-r.1	107762529	uncharacterized LOC107762529
nta-r.1	107809835	uncharacterized LOC107809835
nta-r.1	107806867	uncharacterized LOC107806867
osa-u.5	4352518	serine/arginine repetitive matrix protein 2
osa-u.5	4334541	uncharacterized LOC4334541
zma-u.5	100502463	HIT zinc finger
zma-u.5	100279309	HIT zinc finger
zma-u.5	100281422	uncharacterized LOC100281422
tae-r.2	123102569	eukaryotic translation initiation factor 5B
tae-r.2	123105593	INO80 complex subunit B
tae-r.2	123110757	eukaryotic translation initiation factor 5B
hvu-r.1	123395343	eukaryotic translation initiation factor 5B-like
hvu-r.1	123452937	INO80 complex subunit B-like
sbi-r.1	8057081	uncharacterized LOC8057081
sbi-r.1	8068839	eukaryotic translation initiation factor 5B
bdi-r.1	100827327	cylicin-2
bdi-r.1	100842627	INO80 complex subunit B

Top 50 coexpressed genes to 111205233 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 111205233 (bna-r.1 coexpression data)

CoexMap"111205233"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006338 [list] [network] chromatin remodeling

(373 genes)

IEA

GO CC

GO:0031011 [list] [network] Ino80 complex

(38 genes)

IEA

GO MF

Protein

XP_022556475.1 [sequence] [blastp]
XP_022556476.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_022556475.1)
nucl 9	(predict for XP_022556476.1)

Subcellular
localization
TargetP

chlo 9	(predict for XP_022556475.1)
chlo 9	(predict for XP_022556476.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 111205233	bna-r.1 for 125584364	bna-r.1 for 111214157	bna-r.1 for 111213905	bra-r.6 for 103849764	bra-r.6 for 103859174	bra-r.6 for 103866388	ath-u.5 for AT2G47350	ath-u.5 for AT3G06660	ath-u.5 for AT1G56460	ghi-r.1 for 107908498	ghi-r.1 for 107909999	ghi-r.1 for 107938649	cit-r.1 for 102624196	cit-r.1 for 102621326	cit-r.1 for 102607806	gma-u.5 for 100793005	gma-u.5 for 100814323	vvi-u.5 for 100246939	vvi-u.5 for 100261960	ppo-u.5 for 7455424	ppo-u.5 for 7460463	ppo-u.5 for 7471108	mtr-u.5 for 112416763	mtr-u.5 for 112421058	sly-u.5 for 101249962	sly-u.5 for 101265365	sot-r.1 for 102597315	sot-r.1 for 102579727	nta-r.1 for 107762529	nta-r.1 for 107809835	nta-r.1 for 107806867	osa-u.5 for 4352518	osa-u.5 for 4334541	zma-u.5 for 100502463	zma-u.5 for 100279309	zma-u.5 for 100281422	tae-r.2 for 123102569	tae-r.2 for 123105593	tae-r.2 for 123110757	hvu-r.1 for 123395343	hvu-r.1 for 123452937	sbi-r.1 for 8057081	sbi-r.1 for 8068839	bdi-r.1 for 100827327	bdi-r.1 for 100842627

Ortholog

Ortholog ID: 1968

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

INO80 complex subunit B-like

uncharacterized LOC111213905

uncharacterized LOC106390540

INO80 complex subunit B

hepatoma-derived growth factor-related protein 2

proline-rich protein 12

HIT zinc finger and PAPA-1-like domain-containing protein

PAPA-1-like family protein / zinc finger (HIT type) family protein

HIT zinc finger and PAPA-1-like domain-containing protein

triadin

uncharacterized LOC107938649

uncharacterized LOC107886359

uncharacterized LOC102624196

uncharacterized LOC102621326

uncharacterized LOC102607806

calponin homology domain-containing protein DDB_G0272472

uncharacterized LOC100246939

uncharacterized LOC100261960

uncharacterized LOC7460463

uncharacterized LOC7471108

uncharacterized LOC7478896

myb-like protein V

uncharacterized LOC112421058

actin cytoskeleton-regulatory complex protein PAN1

uncharacterized LOC101265365

uncharacterized LOC102597315

uncharacterized LOC102579727

uncharacterized LOC107809835

uncharacterized LOC107799098

uncharacterized LOC107792467

serine/arginine repetitive matrix protein 2

uncharacterized LOC4334541

HIT zinc finger

uncharacterized LOC100281422

eukaryotic translation initiation factor 5B

INO80 complex subunit B

eukaryotic translation initiation factor 5B

eukaryotic translation initiation factor 5B-like

INO80 complex subunit B-like

uncharacterized LOC8057081

eukaryotic translation initiation factor 5B

cylicin-2

INO80 complex subunit B

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	2
bna03450	Non-homologous end-joining	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	2
bna00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00970	Aminoacyl-tRNA biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2
ghi03420	Nucleotide excision repair	2
ghi00310	Lysine degradation	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3
cit03015	mRNA surveillance pathway	2
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	4
ppo04814	Motor proteins	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	2
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	4
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00460	Cyanoamino acid metabolism	2
nta00500	Starch and sucrose metabolism	2
nta00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae03040	Spliceosome	3
tae03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	6

Expression

Expression pattern

Entrez Gene ID^*

111214157

111213905

106390540

103849764

103866388

103858242

819348

819851

842099

107909999

107938649

107886359

102624196

102621326

102607806

100793005

100814323

100246939

100261960

7460463

7471108

7478896

112416763

112421058

101249962

101265365

102597315

102579727

107809835

107799098

107792467

4352518

4334541

100502463

100279309

100281422

123102569

123105593

123110757

123395343

123452937

8057081

8068839

100827327

100842627

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	3	2	2	3	2	2	2	3	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 111205233 (bna-r.1 coexpression data)

Top 50 enrichment test to 111205233 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**