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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111206533   RNA exonuclease 4 
 ath-u.5   AT3G15080   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 gma-u.5   100819122   RNA exonuclease 4 
 gma-u.5   100811497   RNA exonuclease 4 
 vvi-u.5   100241776   uncharacterized LOC100241776 
 ppo-u.5   7485140   RNA exonuclease 4 
 mtr-u.5   25487285   RNA exonuclease 4 
 sly-u.5   101255368   uncharacterized LOC101255368 
 osa-u.5   4345430   uncharacterized LOC4345430 
 zma-u.5   100382188   Polynucleotidyl transferase ribonuclease H-like superfamily protein 

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Top 50 coexpressed genes to 111206533 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111206533 (bna-r.1 coexpression data)

CoexMap"111206533"


bnaLOC111206533 | Entrez gene ID : 111206533    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (171 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (12766 genes)  IEA  
Protein XP_022559354.1 [sequence] [blastp]
XP_048612988.1 [sequence] [blastp]
XP_048612989.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1,  cyto 1,  plas 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_022559354.1)
nucl 5,  chlo 4  (predict for XP_048612988.1)
cyto 4,  nucl 2,  cysk 2,  cysk_nucl 2  (predict for XP_048612989.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_022559354.1)
chlo 7  (predict for XP_048612988.1)
other 7  (predict for XP_048612989.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111206533
ath-u.5
for
AT3G15080
gma-u.5
for
100819122
gma-u.5
for
100811497
vvi-u.5
for
100241776
ppo-u.5
for
7485140
mtr-u.5
for
25487285
sly-u.5
for
101255368
osa-u.5
for
4345430
zma-u.5
for
100382188


Ortholog ID: 10082
Species bna bna bra ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106397474 LOC111206533 LOC103869958 AT3G15080 LOC107918409 LOC107895248 LOC102624058 LOC100819122 LOC100811497 LOC100241776 LOC7485140 LOC25487285 LOC101255368 LOC102581139 LOC107814025 LOC107799784 LOC4345430 LOC100382188 LOC123160197 LOC123147453 LOC123412897 LOC8070003 LOC100827294 CHLRE_11g480060v5
Function* RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 Polynucleotidyl transferase, ribonuclease H-like superfamily protein RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC100241776 RNA exonuclease 4 RNA exonuclease 4 uncharacterized LOC101255368 RNA exonuclease 4 uncharacterized LOC107814025 uncharacterized LOC107799784 uncharacterized LOC4345430 Polynucleotidyl transferase ribonuclease H-like superfamily protein RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 RNA exonuclease 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04122 Sulfur relay system 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106397474 111206533 103869958 820738 107918409 107895248 102624058 100819122 100811497 100241776 7485140 25487285 101255368 102581139 107814025 107799784 4345430 100382188 123160197 123147453 123412897 8070003 100827294 5722921
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