ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	EMB2777	Sas10/U3 ribonucleoprotein (Utp) family protein
gma-u.5	100812322	something about silencing protein 10
gma-u.5	100792030	something about silencing protein 10
vvi-u.5	100264445	protein THALLO
ppo-u.5	18104578	protein THALLO
mtr-u.5	11444542	something about silencing protein 10
sly-u.5	101245920	protein THALLO-like
sly-u.5	101245621	protein THALLO
osa-u.5	4326297	protein THALLO
zma-u.5	100381768	Sas10/U3 ribonucleoprotein (Utp) family protein
zma-u.5	103635805	uncharacterized LOC103635805

functional annotation

KEGG

GO BP

GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

(142 genes)

IEA

GO CC

GO:0032040 [list] [network] small-subunit processome	(155 genes)	IEA
GO:0005730 [list] [network] nucleolus	(615 genes)	IEA

GO MF

Protein

XP_048634736.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 1, mito 1, plas 1, chlo_mito 1, golg_plas 1

(predict for XP_048634736.1)

Subcellular
localization
TargetP

other 7, mito 4

(predict for XP_048634736.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for EMB2777	gma-u.5 for 100812322	gma-u.5 for 100792030	vvi-u.5 for 100264445	ppo-u.5 for 18104578	mtr-u.5 for 11444542	sly-u.5 for 101245920	sly-u.5 for 101245621	osa-u.5 for 4326297	zma-u.5 for 100381768	zma-u.5 for 103635805

Ortholog ID: 5975

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

EMB2777

Function^*

something about silencing protein 10

Sas10/U3 ribonucleoprotein (Utp) family protein

something about silencing protein 10

protein THALLO

something about silencing protein 10

protein THALLO

something about silencing protein 10

protein THALLO

protein THALLO-like

something about silencing protein 10-like

protein THALLO

protein THALLO-like

protein THALLO

Sas10/U3 ribonucleoprotein (Utp) family protein

uncharacterized LOC103635805

something about silencing protein 10

something about silencing protein 10-like

something about silencing protein 10

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	5
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	3
cit03018	RNA degradation	2
cit03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	5
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	6

Expression

Expression pattern

Entrez Gene ID^*

111197784

106388334

103858087

818967

107945130

121215971

102614055

100812322

100792030

100264445

18104578

11444542

101245621

101245920

102600085

102597593

107811333

107779177

4326297

100381768

103635805

123148336

123407331

8055211

100832433

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to EMB2777 (ath-u.5 coexpression data)

Top 50 enrichment test to EMB2777 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	1	1	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to EMB2777 (ath-u.5 coexpression data)

Top 50 enrichment test to EMB2777 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**