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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111212000   zinc finger CCCH domain-containing protein 65-like 
 ath-u.5   EMB1789   CCCH-type zinc finger family protein 
 gma-u.5   102663890   uncharacterized LOC102663890 
 gma-u.5   100816509   zinc finger CCCH domain-containing protein 65 
 vvi-u.5   100268102   zinc finger CCCH domain-containing protein 65 
 ppo-u.5   7497606   uncharacterized LOC7497606 
 mtr-u.5   11437410   uncharacterized LOC11437410 
 mtr-u.5   25488997   zinc finger CCCH domain-containing protein 65 
 sly-u.5   101254691   uncharacterized LOC101254691 
 osa-u.5   4326353   zinc finger CCCH domain-containing protein 7-like 
 zma-u.5   103651515   zinc finger CCCH domain-containing protein 7 

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Top 50 coexpressed genes to 111212000 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111212000 (bna-r.1 coexpression data)

CoexMap"111212000"


bnaLOC111212000 | Entrez gene ID : 111212000    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (225 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (6718 genes)  IEA  
Protein XP_022569089.1 [sequence] [blastp]
XP_022569091.1 [sequence] [blastp]
XP_022569092.1 [sequence] [blastp]
XP_048603072.1 [sequence] [blastp]
XP_048603073.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for XP_022569089.1)
nucl 7,  chlo 2  (predict for XP_022569091.1)
nucl 8,  chlo 1  (predict for XP_022569092.1)
nucl 7,  chlo 2  (predict for XP_048603072.1)
nucl 7,  chlo 2  (predict for XP_048603073.1)
Subcellular
localization
TargetP
other 5  (predict for XP_022569089.1)
other 5  (predict for XP_022569091.1)
other 5  (predict for XP_022569092.1)
other 5  (predict for XP_048603072.1)
other 5  (predict for XP_048603073.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111212000

.
ath-u.5
for
EMB1789

.
gma-u.5
for
102663890

.
gma-u.5
for
100816509

.
vvi-u.5
for
100268102

.
ppo-u.5
for
7497606

.
mtr-u.5
for
11437410

.
mtr-u.5
for
25488997

.
sly-u.5
for
101254691

.
osa-u.5
for
4326353

.
zma-u.5
for
103651515

.


Ortholog ID: 9741
Species ath gma gma sly osa zma vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB1789 LOC100816509 LOC102663890 LOC101254691 LOC4326353 LOC103651515 LOC100268102 LOC7497606 LOC11437410 LOC25488997 LOC123069962 LOC123078422 LOC123443742 LOC123424904 LOC107907134 LOC107895717 LOC106389394 LOC111212000 LOC8078622 LOC102603595 LOC102615714 LOC100840621 LOC107763042 LOC107805435
Function* CCCH-type zinc finger family protein zinc finger CCCH domain-containing protein 65 uncharacterized LOC102663890 uncharacterized LOC101254691 zinc finger CCCH domain-containing protein 7-like zinc finger CCCH domain-containing protein 7 zinc finger CCCH domain-containing protein 65 uncharacterized LOC7497606 uncharacterized LOC11437410 zinc finger CCCH domain-containing protein 65 zinc finger CCCH domain-containing protein 7 zinc finger CCCH domain-containing protein 7 zinc finger CCCH domain-containing protein 7 uncharacterized LOC123424904 uncharacterized LOC107907134 uncharacterized LOC107895717 zinc finger CCCH domain-containing protein 65-like zinc finger CCCH domain-containing protein 65-like zinc finger CCCH domain-containing protein 7 uncharacterized LOC102603595 uncharacterized LOC102615714 zinc finger CCCH domain-containing protein 7 uncharacterized LOC107763042 uncharacterized LOC107805435
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835795 100816509 102663890 101254691 4326353 103651515 100268102 7497606 11437410 25488997 123069962 123078422 123443742 123424904 107907134 107895717 106389394 111212000 8078622 102603595 102615714 100840621 107763042 107805435
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