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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111214129   protein TAB2 homolog, chloroplastic-like 
 bna-r.1   106439166   protein TAB2 homolog, chloroplastic 
 bra-r.6   103859256   protein TAB2 homolog, chloroplastic 
 ath-u.5   ATAB2   RNA binding protein 
 ghi-r.1   107938346   protein TAB2 homolog, chloroplastic 
 ghi-r.1   107900756   protein TAB2 homolog, chloroplastic 
 cit-r.1   102613093   protein TAB2 homolog, chloroplastic 
 gma-u.5   100803590   protein TAB2 homolog, chloroplastic 
 gma-u.5   100795572   RNA binding protein ATAB2-like 
 vvi-u.5   100243060   protein TAB2 homolog, chloroplastic 
 ppo-u.5   7482288   protein TAB2 homolog, chloroplastic 
 ppo-u.5   7482289   protein TAB2 homolog, chloroplastic 
 mtr-u.5   25488779   protein TAB2 homolog, chloroplastic 
 mtr-u.5   11443810   protein TAB2 homolog, chloroplastic 
 sly-u.5   TAB2   photosystem I-related protein TAB2 
 sot-r.1   102603144   uncharacterized LOC102603144 
 nta-r.1   107825652   protein TAB2 homolog, chloroplastic 
 nta-r.1   107783897   protein TAB2 homolog, chloroplastic 
 osa-u.5   4329953   protein TAB2 homolog, chloroplastic-like 
 zma-u.5   100284484   tab2 protein 
 tae-r.2   123137441   protein TAB2 homolog, chloroplastic 
 tae-r.2   123127674   protein TAB2 homolog, chloroplastic 
 tae-r.2   123144787   protein TAB2 homolog, chloroplastic 
 hvu-r.1   123402141   protein TAB2 homolog, chloroplastic 
 sbi-r.1   8072448   protein TAB2 homolog, chloroplastic 
 bdi-r.1   100846528   protein TAB2 homolog, chloroplastic 
 cre-r.1   CHLRE_17g702500v5   uncharacterized protein 

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Top 50 coexpressed genes to 111214129 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111214129 (bna-r.1 coexpression data)

CoexMap"111214129"


bnaLOC111214129 | Entrez gene ID : 111214129    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 2 2 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_022572017.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_022572017.2)
Subcellular
localization
TargetP
mito 2  (predict for XP_022572017.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111214129
bna-r.1
for
106439166
bra-r.6
for
103859256
ath-u.5
for
ATAB2
ghi-r.1
for
107938346
ghi-r.1
for
107900756
cit-r.1
for
102613093
gma-u.5
for
100803590
gma-u.5
for
100795572
vvi-u.5
for
100243060
ppo-u.5
for
7482288
ppo-u.5
for
7482289
mtr-u.5
for
25488779
mtr-u.5
for
11443810
sly-u.5
for
TAB2
sot-r.1
for
102603144
nta-r.1
for
107825652
nta-r.1
for
107783897
osa-u.5
for
4329953
zma-u.5
for
100284484
tae-r.2
for
123137441
tae-r.2
for
123127674
tae-r.2
for
123144787
hvu-r.1
for
123402141
sbi-r.1
for
8072448
bdi-r.1
for
100846528
cre-r.1
for
CHLRE_17g702500v5


Ortholog ID: 8930
Species bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC111214129 LOC106439166 LOC103859256 ATAB2 LOC107938346 LOC107900756 LOC102613093 LOC100803590 LOC100795572 LOC100243060 LOC7482288 LOC7482289 LOC25488779 LOC11443810 TAB2 LOC102603144 LOC107825652 LOC107783897 LOC4329953 LOC100284484 LOC123137441 LOC123127674 LOC123144787 LOC123402141 LOC8072448 LOC100846528 CHLRE_17g702500v5
Function* protein TAB2 homolog, chloroplastic-like protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic RNA binding protein protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic RNA binding protein ATAB2-like protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic photosystem I-related protein TAB2 uncharacterized LOC102603144 protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic-like tab2 protein protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic protein TAB2 homolog, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00860 Porphyrin metabolism 3
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 5
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 5
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 6
osa00190 Oxidative phosphorylation 3
osa00860 Porphyrin metabolism 2
osa00010 Glycolysis / Gluconeogenesis 2
osa00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 8
tae01200 Carbon metabolism 8
tae00710 Carbon fixation by Calvin cycle 5
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 5
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
tae00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 2
bdi01200 Carbon metabolism 2
bdi00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 111214129 106439166 103859256 819992 107938346 107900756 102613093 100803590 100795572 100243060 7482288 7482289 25488779 11443810 101248056 102603144 107825652 107783897 4329953 100284484 123137441 123127674 123144787 123402141 8072448 100846528 5717279
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