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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111215039   elongation factor Tu, chloroplastic-like 
 bna-r.1   125590311   elongation factor Tu, chloroplastic-like 
 bna-r.1   125583874   elongation factor Tu, chloroplastic-like 
 bna-r.1   125590045   elongation factor Tu, chloroplastic-like 
 bra-r.6   103827888   elongation factor Tu, chloroplastic 
 bra-r.6   103834158   elongation factor Tu, chloroplastic-like 
 bra-r.6   103858174   elongation factor Tu, chloroplastic 
 ghi-r.1   107949645   elongation factor Tu, chloroplastic 
 ghi-r.1   107886217   elongation factor Tu, chloroplastic 
 cit-r.1   102625264   elongation factor Tu, chloroplastic 
 gma-u.5   TUFB1   elongation factor Tu 
 gma-u.5   100805960   elongation factor Tu, chloroplastic-like 
 gma-u.5   TUFA   elongation factor Tu, chloroplastic 
 vvi-u.5   100245586   elongation factor Tu, chloroplastic 
 vvi-u.5   100244975   elongation factor TuB, chloroplastic 
 ppo-u.5   7478071   elongation factor Tu, chloroplastic 
 ppo-u.5   7479258   elongation factor Tu, chloroplastic 
 mtr-u.5   11412641   elongation factor Tu, chloroplastic 
 sly-u.5   101245244   elongation factor Tu, chloroplastic 
 sly-u.5   101259256   elongation factor TuB, chloroplastic 
 sot-r.1   102585459   elongation factor TuA, chloroplastic 
 sot-r.1   102584165   elongation factor TuB, chloroplastic 
 nta-r.1   107822214   elongation factor TuB, chloroplastic-like 
 nta-r.1   107818168   elongation factor Tu, chloroplastic-like 
 nta-r.1   107800308   elongation factor TuA, chloroplastic 
 osa-u.5   9270837   elongation factor Tu, chloroplastic 
 zma-u.5   100283194   uncharacterized LOC100283194 
 zma-u.5   100284040   elongation factor Tu 
 tae-r.2   123144695   elongation factor Tu, chloroplastic 
 tae-r.2   123127593   elongation factor Tu, chloroplastic 
 tae-r.2   123137329   elongation factor Tu, chloroplastic 
 hvu-r.1   123401530   elongation factor Tu, chloroplastic 
 sbi-r.1   8056476   elongation factor Tu, chloroplastic 
 bdi-r.1   100830133   elongation factor Tu, chloroplastic 

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Top 50 coexpressed genes to 111215039 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111215039 (bna-r.1 coexpression data)

CoexMap"111215039"


bnaLOC111215039 | Entrez gene ID : 111215039    
Species bna bra ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre ath
Paralog 4 3 2 1 3 2 2 1 2 2 3 1 2 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04626 [list] [network] Plant-pathogen interaction (721 genes)
GO BP
GO:0070125 [list] [network] mitochondrial translational elongation  (21 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1831 genes)  IEA  
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (90 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (685 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (777 genes)  IEA  
Protein XP_022573820.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_022573820.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_022573820.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111215039
bna-r.1
for
125590311
bna-r.1
for
125583874
bna-r.1
for
125590045
bra-r.6
for
103827888
bra-r.6
for
103834158
bra-r.6
for
103858174
ghi-r.1
for
107949645
ghi-r.1
for
107886217
cit-r.1
for
102625264
gma-u.5
for
TUFB1
gma-u.5
for
100805960
gma-u.5
for
TUFA
vvi-u.5
for
100245586
vvi-u.5
for
100244975
ppo-u.5
for
7478071
ppo-u.5
for
7479258
mtr-u.5
for
11412641
sly-u.5
for
101245244
sly-u.5
for
101259256
sot-r.1
for
102585459
sot-r.1
for
102584165
nta-r.1
for
107822214
nta-r.1
for
107818168
nta-r.1
for
107800308
osa-u.5
for
9270837
zma-u.5
for
100283194
zma-u.5
for
100284040
tae-r.2
for
123144695
tae-r.2
for
123127593
tae-r.2
for
123137329
hvu-r.1
for
123401530
sbi-r.1
for
8056476
bdi-r.1
for
100830133


Ortholog ID: 4266
Species bna bna bna bra bra ghi ghi cit gma gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC125583874 LOC125590045 LOC106375704 LOC103827888 LOC103834158 LOC107949645 LOC107886217 LOC102625264 TUFB1 LOC100805960 TUFA LOC100245586 LOC100244975 LOC7478071 LOC7479258 LOC11412641 LOC101245244 LOC101259256 LOC102585459 LOC102584165 LOC107822214 LOC107818168 LOC107820323 LOC9270837 LOC100283194 LOC100284040 LOC123144695 LOC123127593 LOC123137329 LOC123401530 LOC8056476 LOC100830133
Function* elongation factor Tu, chloroplastic-like elongation factor Tu, chloroplastic-like elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic-like elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu elongation factor Tu, chloroplastic-like elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor TuB, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor TuB, chloroplastic elongation factor TuA, chloroplastic elongation factor TuB, chloroplastic elongation factor TuB, chloroplastic-like elongation factor Tu, chloroplastic-like elongation factor TuB, chloroplastic elongation factor Tu, chloroplastic uncharacterized LOC100283194 elongation factor Tu elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic elongation factor Tu, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 10
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00030 Pentose phosphate pathway 4
bra00710 Carbon fixation by Calvin cycle 4
bra01200 Carbon metabolism 4
bra01230 Biosynthesis of amino acids 4
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit03010 Ribosome 3
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00195 Photosynthesis 3
gma00190 Oxidative phosphorylation 2
gma04626 Plant-pathogen interaction 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma00030 Pentose phosphate pathway 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi03010 Ribosome 4
vvi01240 Biosynthesis of cofactors 3
vvi01200 Carbon metabolism 3
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 7
vvi01200 Carbon metabolism 7
vvi00195 Photosynthesis 3
vvi00190 Oxidative phosphorylation 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01230 Biosynthesis of amino acids 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo00710 Carbon fixation by Calvin cycle 3
ppo01230 Biosynthesis of amino acids 3
ppo00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
sly00970 Aminoacyl-tRNA biosynthesis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00270 Cysteine and methionine metabolism 3
nta00620 Pyruvate metabolism 3
nta00710 Carbon fixation by Calvin cycle 3
nta01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00270 Cysteine and methionine metabolism 3
nta00020 Citrate cycle (TCA cycle) 2
nta00566 Sulfoquinovose metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta04626 Plant-pathogen interaction 4
nta00620 Pyruvate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04626 Plant-pathogen interaction 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 3
zma04626 Plant-pathogen interaction 2
zma00906 Carotenoid biosynthesis 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae04626 Plant-pathogen interaction 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125583874 125590045 106375704 103827888 103834158 107949645 107886217 102625264 100791320 100805960 100793431 100245586 100244975 7478071 7479258 11412641 101245244 101259256 102585459 102584165 107822214 107818168 107820323 9270837 100283194 100284040 123144695 123127593 123137329 123401530 8056476 100830133
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