Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   112271456   ubiquitin receptor RAD23b-like 
 osa-u.5   4345037   uncharacterized LOC4345037 
 zma-u.5   103626687   OSJNBa0041A02.21-like protein 
 zma-u.5   103645981   OSJNBa0041A02.21-like protein 
 zma-u.5   103654876   uncharacterized LOC103654876 
 ath-u.5   AT5G43150   elongation factor 
 gma-u.5   100305542   uncharacterized LOC100305542 
 gma-u.5   100797484   uncharacterized LOC100797484 
 sly-u.5   101254501   uncharacterized LOC101254501 
 vvi-u.5   104880787   uncharacterized LOC104880787 
 mtr-u.5   25488003   uncharacterized LOC25488003 
 mtr-u.5   11434429   uncharacterized LOC11434429 

close


Top 50 coexpressed genes to 112271456 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 112271456 (bdi-r.1 coexpression data)

CoexMap"112271456"


bdiLOC112271456 | Entrez gene ID : 112271456    
Species bdi osa zma ath gma sly vvi mtr tae hvu ghi cit bra cre sbi ppo bna nta sot
Paralog 1 1 3 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03420 [list] [network] Nucleotide excision repair (85 genes)
bdi04141 [list] [network] Protein processing in endoplasmic reticulum (196 genes)
GO BP
GO:0006289 [list] [network] nucleotide-excision repair  (42 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (151 genes)  IEA  
GO CC
GO:0005654 [list] [network] nucleoplasm  (221 genes)  IEA  
GO:0005829 [list] [network] cytosol  (825 genes)  IEA  
GO MF
GO:0070628 [list] [network] proteasome binding  (14 genes)  IEA  
GO:0031593 [list] [network] polyubiquitin modification-dependent protein binding  (24 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (39 genes)  IEA  
GO:0043130 [list] [network] ubiquitin binding  (64 genes)  IEA  
Protein XP_024316331.1 [sequence] [blastp]
XP_024316332.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_024316331.1)
nucl 4,  mito 3,  cyto 2,  cysk_nucl 2  (predict for XP_024316332.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_024316331.1)
other 8  (predict for XP_024316332.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
112271456

.
osa-u.5
for
4345037

.
zma-u.5
for
103626687

.
zma-u.5
for
103645981

.
zma-u.5
for
103654876

.
ath-u.5
for
AT5G43150

.
gma-u.5
for
100305542

.
gma-u.5
for
100797484

.
sly-u.5
for
101254501

.
vvi-u.5
for
104880787

.
mtr-u.5
for
25488003

.
mtr-u.5
for
11434429

.


Ortholog ID: 1996
Species ath gma gma sly osa zma zma bra vvi mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi cit cit bdi bdi
Symbol AT5G43150 LOC100797484 LOC100305542 LOC101254501 LOC4336899 LOC103645981 LOC100275046 LOC103827990 LOC104880787 LOC25488003 LOC11434429 LOC123190286 LOC123100180 LOC123411991 LOC123410463 LOC107913822 LOC107906018 LOC106356517 BNAA06G36850D LOC8057870 LOC8058457 LOC112497688 LOC102619868 LOC100821777 LOC100845602
Function* elongation factor uncharacterized LOC100797484 uncharacterized LOC100305542 uncharacterized LOC101254501 uncharacterized LOC4336899 OSJNBa0041A02.21-like protein uncharacterized LOC100275046 uncharacterized LOC103827990 uncharacterized LOC104880787 uncharacterized LOC25488003 uncharacterized LOC11434429 uncharacterized LOC123190286 uncharacterized LOC123100180 uncharacterized LOC123411991 uncharacterized LOC123410463 uncharacterized LOC107913822 uncharacterized LOC107906018 uncharacterized LOC106356517 uncharacterized BNAA06G36850D uncharacterized LOC8057870 uncharacterized LOC8058457 uncharacterized LOC112497688 uncharacterized LOC102619868 uncharacterized LOC100821777 uncharacterized LOC100845602
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 3
bra00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04626 Plant-pathogen interaction 4
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04626 Plant-pathogen interaction 4
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 8
sbi04016 MAPK signaling pathway - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00460 Cyanoamino acid metabolism 4
sbi00500 Starch and sucrose metabolism 4
sbi00999 Biosynthesis of various plant secondary metabolites 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
bdi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834332 100797484 100305542 101254501 4336899 103645981 100275046 103827990 104880787 25488003 11434429 123190286 123100180 123411991 123410463 107913822 107906018 106356517 106349547 8057870 8058457 112497688 102619868 100821777 100845602
The preparation time of this page was 0.1 [sec].