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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7462924   dehydration-responsive element-binding protein 3 
 ppo-u.5   7462301   dehydration-responsive element-binding protein 3 
 gma-u.5   AP2-2   AP2 domain-containing transcription factor 2 
 mtr-u.5   25490133   dehydration-responsive element-binding protein 3 
 mtr-u.5   11434620   dehydration-responsive element-binding protein 3 
 mtr-u.5   11436276   ethylene-responsive transcription factor ERF034 
 ath-u.5   TINY2   Integrase-type DNA-binding superfamily protein 
 ath-u.5   ERF38   ERF family protein 38 
 bra-r.6   103862199   ethylene-responsive transcription factor ERF043 
 vvi-u.5   100243009   dehydration-responsive element-binding protein 3 
 vvi-u.5   100249652   ethylene-responsive transcription factor ERF038 
 vvi-u.5   100252531   dehydration-responsive element-binding protein 3 
 ghi-r.1   107923204   ethylene-responsive transcription factor ERF038 
 bna-r.1   106414129   ethylene-responsive transcription factor ERF035 
 bna-r.1   111200352   ethylene-responsive transcription factor ERF043-like 
 bna-r.1   106409054   ethylene-responsive transcription factor ERF043 
 cit-r.1   102620560   ethylene-responsive transcription factor ERF038 
 cit-r.1   102608812   dehydration-responsive element-binding protein 3 
 cit-r.1   102627981   ethylene-responsive transcription factor ERF036 
 sly-u.5   ERF-H5   ethylene-responsive transcription factor 4 
 sly-u.5   ERF-H7   ethylene response factor H.7 
 sot-r.1   102589769   ethylene-responsive transcription factor ERF034-like 
 nta-r.1   107796637   dehydration-responsive element-binding protein 3-like 
 nta-r.1   107803926   dehydration-responsive element-binding protein 3 
 nta-r.1   107806442   dehydration-responsive element-binding protein 3 
 osa-u.5   4330203   ethylene-responsive transcription factor ERF039 
 osa-u.5   4336587   ethylene-responsive transcription factor ERF038 
 zma-u.5   103627503   ethylene-responsive transcription factor ERF039 
 tae-r.2   123190138   ethylene-responsive transcription factor ERF039 
 tae-r.2   123134307   ethylene-responsive transcription factor ERF039 
 hvu-r.1   123430693   ethylene-responsive transcription factor ERF039-like 
 sbi-r.1   8073956   ethylene-responsive transcription factor ERF039 
 bdi-r.1   100821891   ethylene-responsive transcription factor ERF039 
 bdi-r.1   100821926   ethylene-responsive transcription factor ERF038 
 bdi-r.1   100826141   ethylene-responsive transcription factor ERF039 

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Top 50 coexpressed genes to 7462924 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7462924 (ppo-u.5 coexpression data)

CoexMap"112327954"


ppoLOC112327954 | Entrez gene ID : 112327954    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 3 2 1 3 1 3 3 2 1 3 2 1 2 1 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1363 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_024459367.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_024459367.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_024459367.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7462924
ppo-u.5
for
7462301
gma-u.5
for
AP2-2
mtr-u.5
for
25490133
mtr-u.5
for
11434620
mtr-u.5
for
11436276
ath-u.5
for
TINY2
ath-u.5
for
ERF38
bra-r.6
for
103862199
vvi-u.5
for
100243009
vvi-u.5
for
100249652
vvi-u.5
for
100252531
ghi-r.1
for
107923204
bna-r.1
for
106414129
bna-r.1
for
111200352
bna-r.1
for
106409054
cit-r.1
for
102620560
cit-r.1
for
102608812
cit-r.1
for
102627981
sly-u.5
for
ERF-H5
sly-u.5
for
ERF-H7
sot-r.1
for
102589769
nta-r.1
for
107796637
nta-r.1
for
107803926
nta-r.1
for
107806442
osa-u.5
for
4330203
osa-u.5
for
4336587
zma-u.5
for
103627503
tae-r.2
for
123190138
tae-r.2
for
123134307
hvu-r.1
for
123430693
sbi-r.1
for
8073956
bdi-r.1
for
100821891
bdi-r.1
for
100821926
bdi-r.1
for
100826141


Ortholog ID: 201
Species ppo ppo gma gma gma mtr mtr ath ath ath bra bra vvi vvi vvi ghi ghi ghi bna cit cit sly sot nta nta osa osa tae tae hvu hvu sbi bdi
Symbol LOC7462924 LOC18094599 AP2-2 LOC100784134 LOC100812293 LOC11442235 LOC11420693 TINY2 AT3G60490 tny LOC103869194 LOC103846706 LOC100243009 LOC100249652 LOC100268038 LOC107923204 LOC107897100 LOC107929345 LOC106348553 LOC102627981 LOC102611994 ERF-H8 LOC102589769 LOC107803926 LOC107815218 LOC4336587 LOC107280052 LOC123041822 LOC123049786 LOC123430693 LOC123402106 LOC8085554 LOC100826141
Function* dehydration-responsive element-binding protein 3 ethylene-responsive transcription factor ERF039 AP2 domain-containing transcription factor 2 ethylene-responsive transcription factor TINY ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF034 ethylene-responsive transcription factor ERF036 Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein ethylene-responsive transcription factor ERF039 dehydration-responsive element-binding protein 3 dehydration-responsive element-binding protein 3 ethylene-responsive transcription factor ERF038 ethylene-responsive transcription factor TINY ethylene-responsive transcription factor ERF038 dehydration-responsive element-binding protein 3 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor TINY-like ethylene-responsive transcription factor ERF036 ethylene-responsive transcription factor ERF039 ethylene response factor H.8 ethylene-responsive transcription factor ERF034-like dehydration-responsive element-binding protein 3 dehydration-responsive element-binding protein 3-like ethylene-responsive transcription factor ERF038 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039-like ethylene-responsive transcription factor ERF038-like ethylene-responsive transcription factor TINY ethylene-responsive transcription factor ERF039
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 3
gma00071 Fatty acid degradation 3
gma01212 Fatty acid metabolism 3
gma04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 2
bna00562 Inositol phosphate metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 3
hvu04517 IgSF CAM signaling 3
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 5
hvu00062 Fatty acid elongation 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7462924 18094599 100813069 100784134 100812293 11442235 11420693 831031 825220 832650 103869194 103846706 100243009 100249652 100268038 107923204 107897100 107929345 106348553 102627981 102611994 101254925 102589769 107803926 107815218 4336587 107280052 123041822 123049786 123430693 123402106 8085554 100826141
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