ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	18094858	protein HOTHEAD
ppo-u.5	18096754	protein HOTHEAD
ppo-u.5	7478081	protein HOTHEAD
gma-u.5	100818122	protein HOTHEAD
gma-u.5	100796752	protein HOTHEAD
mtr-u.5	11432941	protein HOTHEAD
mtr-u.5	11417572	protein HOTHEAD
ath-u.5	AT3G56060	Glucose-methanol-choline (GMC) oxidoreductase family protein
ath-u.5	HTH	Glucose-methanol-choline (GMC) oxidoreductase family protein
bra-r.6	103852814	protein HOTHEAD
bra-r.6	103841513	protein HOTHEAD
bra-r.6	103841509	protein HOTHEAD
vvi-u.5	100241724	protein HOTHEAD
vvi-u.5	100266705	protein HOTHEAD
vvi-u.5	100264005	protein HOTHEAD
ghi-r.1	107923256	protein HOTHEAD
ghi-r.1	107926983	protein HOTHEAD
ghi-r.1	107906346	(R)-mandelonitrile lyase-like
bna-r.1	106354249	(R)-mandelonitrile lyase-like
bna-r.1	106345900	protein HOTHEAD-like
cit-r.1	102626291	(R)-mandelonitrile lyase-like
cit-r.1	102613980	protein HOTHEAD
cit-r.1	102611629	protein HOTHEAD
sly-u.5	101244002	protein HOTHEAD
sly-u.5	101250204	(R)-mandelonitrile lyase-like
sly-u.5	101264132	protein HOTHEAD
sot-r.1	102587321	protein HOTHEAD
sot-r.1	102588108	protein HOTHEAD-like
sot-r.1	102602541	protein HOTHEAD
nta-r.1	107767080	protein HOTHEAD
nta-r.1	107814122	protein HOTHEAD
osa-u.5	4345513	protein HOTHEAD
osa-u.5	4349162	protein HOTHEAD
zma-u.5	100382402	uncharacterized LOC100382402
zma-u.5	100192014	protein HOTHEAD
tae-r.2	123111794	protein HOTHEAD
tae-r.2	123103587	protein HOTHEAD
hvu-r.1	123395083	protein HOTHEAD-like
sbi-r.1	8073219	protein HOTHEAD
bdi-r.1	100830847	protein HOTHEAD
bdi-r.1	100836391	protein HOTHEAD
cre-r.1	CHLRE_12g514200v5	uncharacterized protein

Top 50 coexpressed genes to 18094858 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18094858 (ppo-u.5 coexpression data)

CoexMap"112328933"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0050660 [list] [network] flavin adenine dinucleotide binding	(187 genes)	IEA
GO:0016614 [list] [network] oxidoreductase activity, acting on CH-OH group of donors	(260 genes)	IEA

Protein

XP_052312641.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1

(predict for XP_052312641.1)

Subcellular
localization
TargetP

scret 7

(predict for XP_052312641.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 18094858	ppo-u.5 for 18096754	ppo-u.5 for 7478081	gma-u.5 for 100818122	gma-u.5 for 100796752	mtr-u.5 for 11432941	mtr-u.5 for 11417572	ath-u.5 for AT3G56060	ath-u.5 for HTH	bra-r.6 for 103852814	bra-r.6 for 103841513	bra-r.6 for 103841509	vvi-u.5 for 100241724	vvi-u.5 for 100266705	vvi-u.5 for 100264005	ghi-r.1 for 107923256	ghi-r.1 for 107926983	ghi-r.1 for 107906346	bna-r.1 for 106354249	bna-r.1 for 106345900	cit-r.1 for 102626291	cit-r.1 for 102613980	cit-r.1 for 102611629	sly-u.5 for 101244002	sly-u.5 for 101250204	sly-u.5 for 101264132	sot-r.1 for 102587321	sot-r.1 for 102588108	sot-r.1 for 102602541	nta-r.1 for 107767080	nta-r.1 for 107814122	osa-u.5 for 4345513	osa-u.5 for 4349162	zma-u.5 for 100382402	zma-u.5 for 100192014	tae-r.2 for 123111794	tae-r.2 for 123103587	hvu-r.1 for 123395083	sbi-r.1 for 8073219	bdi-r.1 for 100830847	bdi-r.1 for 100836391	cre-r.1 for CHLRE_12g514200v5

Ortholog

Ortholog ID: 274

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

HTH

Function^*

protein HOTHEAD

Glucose-methanol-choline (GMC) oxidoreductase family protein

protein HOTHEAD-like

protein HOTHEAD

(R)-mandelonitrile lyase-like

protein HOTHEAD

(R)-mandelonitrile lyase-like

protein HOTHEAD

(R)-mandelonitrile lyase-like

uncharacterized LOC100382402

protein HOTHEAD

protein HOTHEAD-like

protein HOTHEAD

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	3
ppo02010	ABC transporters	3
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2
gma00073	Cutin, suberine and wax biosynthesis	2
gma00062	Fatty acid elongation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00531	Glycosaminoglycan degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00770	Pantothenate and CoA biosynthesis	2
ghi01240	Biosynthesis of cofactors	2
ghi00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00053	Ascorbate and aldarate metabolism	4
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi01240	Biosynthesis of cofactors	4
ghi01250	Biosynthesis of nucleotide sugars	4
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00020	Citrate cycle (TCA cycle)	4
bna00620	Pyruvate metabolism	4
bna00785	Lipoic acid metabolism	4
bna01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	2
cit00071	Fatty acid degradation	2
cit01240	Biosynthesis of cofactors	2
cit00061	Fatty acid biosynthesis	2
cit01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00073	Cutin, suberine and wax biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00902	Monoterpenoid biosynthesis	3
sot00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00073	Cutin, suberine and wax biosynthesis	4
nta00940	Phenylpropanoid biosynthesis	2
nta00270	Cysteine and methionine metabolism	2
nta00543	Exopolysaccharide biosynthesis	2
nta00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	2
nta02010	ABC transporters	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00062	Fatty acid elongation	3
zma04626	Plant-pathogen interaction	3
zma04016	MAPK signaling pathway - plant	2
zma00073	Cutin, suberine and wax biosynthesis	2
zma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	4
zma00500	Starch and sucrose metabolism	2
zma00270	Cysteine and methionine metabolism	2
zma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae02010	ABC transporters	3
tae04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	3
bdi01040	Biosynthesis of unsaturated fatty acids	3
bdi01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	5

Expression

Expression pattern

Entrez Gene ID^*

18094858

7478081

100796752

100784433

100777238

25500449

843628

837979

837978

103857158

100241724

100264005

100246317

107906346

107896618

107947284

106404872

106415883

102630146

102626131

101244002

101264132

101248806

102587321

102602541

107767080

107811073

9266710

100382402

100192014

100281523

123049493

123190021

123061007

123395083

8073219

8055580

100836391

5728543

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	2	2	3	3	3	2	3	3	3	2	2	2	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18094858 (ppo-u.5 coexpression data)

Top 50 enrichment test to 18094858 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**