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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   112420341   CHD3-type chromatin-remodeling factor PICKLE-like 
 mtr-r.5   112420341   CHD3-type chromatin-remodeling factor PICKLE-like 
 mtr-u.5   11436035   CHD3-type chromatin-remodeling factor PICKLE 
 gma-u.5   100804203   CHD3-type chromatin-remodeling factor PICKLE 
 gma-u.5   100790230   CHD3-type chromatin-remodeling factor PICKLE 
 ppo-u.5   7468676   CHD3-type chromatin-remodeling factor PICKLE 
 ppo-u.5   7458410   CHD3-type chromatin-remodeling factor PICKLE 
 ath-u.5   PKL   chromatin remodeling factor CHD3 (PICKLE) 
 vvi-u.5   100261114   CHD3-type chromatin-remodeling factor PICKLE 
 sly-u.5   101268002   CHD3-type chromatin-remodeling factor PICKLE 
 sly-u.5   101263831   CHD3-type chromatin-remodeling factor PICKLE-like 
 osa-u.5   9268973   CHD3-type chromatin-remodeling factor PICKLE 
 zma-u.5   103637982   CHD3-type chromatin-remodeling factor PICKLE 

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Top 50 coexpressed genes to 112420341 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112420341 (mtr-u.5 coexpression data)

CoexMap"112420341"


mtrLOC112420341 | Entrez gene ID : 112420341    
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (168 genes)  IEA  
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2104 genes)  IEA  
Protein XP_039687214.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cyto_E.R. 2,  nucl 2,  plas 1,  cysk_nucl 1  (predict for XP_039687214.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_039687214.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
112420341

.
mtr-r.5
for
112420341

.
mtr-u.5
for
11436035

.
gma-u.5
for
100804203

.
gma-u.5
for
100790230

.
ppo-u.5
for
7468676

.
ppo-u.5
for
7458410

.
ath-u.5
for
PKL

.
vvi-u.5
for
100261114

.
sly-u.5
for
101268002

.
sly-u.5
for
101263831

.
osa-u.5
for
9268973

.
zma-u.5
for
103637982

.


Ortholog ID: 5951
Species ath gma sly sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol PKL LOC100804203 LOC101268002 LOC101263831 LOC9268973 LOC103637982 LOC103842207 LOC100261114 LOC7458410 LOC7468676 LOC11436035 LOC123159597 LOC123167550 LOC123410678 LOC107888393 LOC107953745 LOC106389773 LOC106363680 CHLRE_08g377200v5 LOC8065411 LOC102578233 LOC102597816 LOC102621881 LOC100827866 LOC107808298 LOC107798074
Function* chromatin remodeling factor CHD3 (PICKLE) CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE-like CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE uncharacterized protein CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE-like CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE CHD3-type chromatin-remodeling factor PICKLE
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 5
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 3
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03420 Nucleotide excision repair 3
sbi03040 Spliceosome 2
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 5
nta03008 Ribosome biogenesis in eukaryotes 3
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817055 100804203 101268002 101263831 9268973 103637982 103842207 100261114 7458410 7468676 11436035 123159597 123167550 123410678 107888393 107953745 106389773 106363680 5719923 8065411 102578233 102597816 102621881 100827866 107808298 107798074
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