ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	107275911	protein DETOXIFICATION 42
osa-u.5	4332069	protein DETOXIFICATION 42
osa-u.5	4347774	protein DETOXIFICATION 45, chloroplastic
tae-r.2	123060391	protein DETOXIFICATION 42
tae-r.2	123111400	protein DETOXIFICATION 44, chloroplastic
tae-r.2	123129242	protein DETOXIFICATION 45, chloroplastic
hvu-r.1	123444390	protein DETOXIFICATION 42-like
hvu-r.1	123448136	protein DETOXIFICATION 44, chloroplastic-like
bdi-r.1	100836155	protein DETOXIFICATION 45, chloroplastic
bdi-r.1	100831075	protein DETOXIFICATION 42
bdi-r.1	100825239	protein DETOXIFICATION 45, chloroplastic
zma-u.5	103630881	uncharacterized LOC103630881
zma-u.5	103633151	protein DETOXIFICATION 45, chloroplastic
zma-u.5	100501783	uncharacterized LOC100501783
sbi-r.1	8085298	protein DETOXIFICATION 42
sbi-r.1	8074023	protein DETOXIFICATION 42
sbi-r.1	110433897	protein DETOXIFICATION 45, chloroplastic-like
ath-u.5	AT2G38330	MATE efflux family protein
ath-u.5	FRD3	MATE efflux family protein
ath-u.5	AT4G38380	MATE efflux family protein
gma-u.5	100797693	protein DETOXIFICATION 44, chloroplastic
gma-u.5	100805918	protein DETOXIFICATION 44, chloroplastic
gma-u.5	MATE13	citrate-proton symporter
sly-u.5	101250658	protein DETOXIFICATION 42
sly-u.5	101266441	protein DETOXIFICATION 42-like
bra-r.6	103859257	protein DETOXIFICATION 43
bra-r.6	103870617	protein DETOXIFICATION 43
vvi-u.5	100267546	protein DETOXIFICATION 45, chloroplastic
vvi-u.5	100241685	protein DETOXIFICATION 42
ppo-u.5	7488720	protein DETOXIFICATION 44, chloroplastic
ppo-u.5	7482281	protein DETOXIFICATION 43
ppo-u.5	7480083	protein DETOXIFICATION 43
mtr-u.5	11444674	protein DETOXIFICATION 43
mtr-u.5	11412157	protein DETOXIFICATION 44, chloroplastic
mtr-u.5	11421059	protein DETOXIFICATION 45, chloroplastic
ghi-r.1	107918626	protein DETOXIFICATION 43
ghi-r.1	107921368	protein DETOXIFICATION 42
ghi-r.1	107906529	protein DETOXIFICATION 43
bna-r.1	111198031	protein DETOXIFICATION 42-like
bna-r.1	125580421	protein DETOXIFICATION 43-like
bna-r.1	125574806	protein DETOXIFICATION 42-like
sot-r.1	102582950	protein DETOXIFICATION 43
sot-r.1	102590197	protein DETOXIFICATION 45, chloroplastic-like
sot-r.1	102592318	protein DETOXIFICATION 43-like
cit-r.1	102621711	protein DETOXIFICATION 45, chloroplastic
cit-r.1	102630831	protein DETOXIFICATION 42-like
cit-r.1	102628844	protein DETOXIFICATION 44, chloroplastic
nta-r.1	107780510	protein DETOXIFICATION 45, chloroplastic
nta-r.1	107823327	protein DETOXIFICATION 42-like
cre-r.1	CHLRE_08g369600v5	uncharacterized protein
cre-r.1	CHLRE_17g739650v5	uncharacterized protein

Top 50 coexpressed genes to 107275911 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107275911 (osa-u.5 coexpression data)

CoexMap"112543456"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(1003 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3446 genes)

IEA

GO MF

GO:0042910 [list] [network] xenobiotic transmembrane transporter activity	(53 genes)	IEA
GO:0015297 [list] [network] antiporter activity	(152 genes)	IEA

Protein

NP_001350568.1 [sequence] [blastp]
XP_066161143.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, plas 1	(predict for NP_001350568.1)
chlo 9	(predict for XP_066161143.1)

Subcellular
localization
TargetP

chlo 9	(predict for NP_001350568.1)
chlo 9	(predict for XP_066161143.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 107275911	osa-u.5 for 4332069	osa-u.5 for 4347774	tae-r.2 for 123060391	tae-r.2 for 123111400	tae-r.2 for 123129242	hvu-r.1 for 123444390	hvu-r.1 for 123448136	bdi-r.1 for 100836155	bdi-r.1 for 100831075	bdi-r.1 for 100825239	zma-u.5 for 103630881	zma-u.5 for 103633151	zma-u.5 for 100501783	sbi-r.1 for 8085298	sbi-r.1 for 8074023	sbi-r.1 for 110433897	ath-u.5 for AT2G38330	ath-u.5 for FRD3	ath-u.5 for AT4G38380	gma-u.5 for 100797693	gma-u.5 for 100805918	gma-u.5 for MATE13	sly-u.5 for 101250658	sly-u.5 for 101266441	bra-r.6 for 103859257	bra-r.6 for 103870617	vvi-u.5 for 100267546	vvi-u.5 for 100241685	ppo-u.5 for 7488720	ppo-u.5 for 7482281	ppo-u.5 for 7480083	mtr-u.5 for 11444674	mtr-u.5 for 11412157	mtr-u.5 for 11421059	ghi-r.1 for 107918626	ghi-r.1 for 107921368	ghi-r.1 for 107906529	bna-r.1 for 111198031	bna-r.1 for 125580421	bna-r.1 for 125574806	sot-r.1 for 102582950	sot-r.1 for 102590197	sot-r.1 for 102592318	cit-r.1 for 102621711	cit-r.1 for 102630831	cit-r.1 for 102628844	nta-r.1 for 107780510	nta-r.1 for 107823327	cre-r.1 for CHLRE_08g369600v5	cre-r.1 for CHLRE_17g739650v5

Ortholog

Ortholog ID: 361

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

FRD3

Function^*

protein DETOXIFICATION 42

protein DETOXIFICATION 45, chloroplastic

protein DETOXIFICATION 42

protein DETOXIFICATION 45, chloroplastic

protein DETOXIFICATION 42

protein DETOXIFICATION 44, chloroplastic-like

protein DETOXIFICATION 45, chloroplastic

uncharacterized LOC100840460

protein DETOXIFICATION 42

uncharacterized LOC103630881

uncharacterized LOC100501783

uncharacterized LOC100322876

protein DETOXIFICATION 42

protein DETOXIFICATION 45, chloroplastic-like

MATE efflux family protein

protein DETOXIFICATION 44, chloroplastic

protein DETOXIFICATION 43

protein DETOXIFICATION 45, chloroplastic

protein DETOXIFICATION 42-like

protein DETOXIFICATION 43

protein DETOXIFICATION 42

protein DETOXIFICATION 45, chloroplastic

protein DETOXIFICATION 42

protein DETOXIFICATION 43

protein DETOXIFICATION 45, chloroplastic

protein DETOXIFICATION 43

protein DETOXIFICATION 44, chloroplastic

protein DETOXIFICATION 42

protein DETOXIFICATION 43-like

protein DETOXIFICATION 42

protein DETOXIFICATION 45, chloroplastic

protein DETOXIFICATION 42

protein DETOXIFICATION 45, chloroplastic

protein DETOXIFICATION 44, chloroplastic

protein DETOXIFICATION 43-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2
osa00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	4
osa00270	Cysteine and methionine metabolism	2
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	5
tae00900	Terpenoid backbone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	2
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00999	Biosynthesis of various plant secondary metabolites	3
gma00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	4
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00906	Carotenoid biosynthesis	2
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	3
ppo01200	Carbon metabolism	2
ppo00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	4
bna00513	Various types of N-glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	4
bna00513	Various types of N-glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	3
sot00470	D-Amino acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	3
cit03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00960	Tropane, piperidine and pyridine alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

4332069

9271665

123182400

123140152

123137373

123448136

123406343

100836155

100840460

100842762

103630881

100501783

100322876

8085298

8074023

110433897

819995

829995

841557

100805918

100793398

100791044

101266441

101245696

103859257

103832853

100267546

100241685

7480083

7474953

7492133

11421059

11438253

25501046

107918626

107938337

107958084

106438154

106436116

106401813

102592318

102598780

102604703

102621711

102626459

107809556

107803740

107790395

5721723

5717394

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	2	3	3	3	3	3	2	2	2	3	3	3	3	3	3	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107275911 (osa-u.5 coexpression data)

Top 50 enrichment test to 107275911 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**