ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	112999758	nuclear intron maturase 3, mitochondrial
gma-r.7	112999758	nuclear intron maturase 3, mitochondrial
gma-u.5	100812449	nuclear intron maturase 3, mitochondrial
mtr-u.5	112422855	nuclear intron maturase 3, mitochondrial
mtr-u.5	112421304	nuclear intron maturase 3, mitochondrial
ppo-u.5	112327903	nuclear intron maturase 3, mitochondrial
ath-u.5	AT5G04050	RNA-directed DNA polymerase (reverse transcriptase)
bra-r.6	103847334	nuclear intron maturase 3, mitochondrial
vvi-u.5	100264128	nuclear intron maturase 3, mitochondrial
ghi-r.1	107892540	nuclear intron maturase 3, mitochondrial
ghi-r.1	107889395	nuclear intron maturase 3, mitochondrial-like
bna-r.1	106372667	nuclear intron maturase 3, mitochondrial
bna-r.1	106372516	nuclear intron maturase 3, mitochondrial
cit-r.1	102607317	nuclear intron maturase 3, mitochondrial
sly-u.5	101246113	nuclear intron maturase 3, mitochondrial
sot-r.1	102587557	uncharacterized LOC102587557
nta-r.1	107800159	nuclear intron maturase 3, mitochondrial
nta-r.1	107766291	nuclear intron maturase 3, mitochondrial-like
zma-u.5	103629684	RNA-directed DNA polymerase (reverse transcriptase)
tae-r.2	123168959	nuclear intron maturase 3, mitochondrial
tae-r.2	123159924	nuclear intron maturase 3, mitochondrial
hvu-r.1	123449772	nuclear intron maturase 3, mitochondrial-like
hvu-r.1	123412494	nuclear intron maturase 3, mitochondrial-like
sbi-r.1	8069370	uncharacterized LOC8069370
bdi-r.1	100827431	nuclear intron maturase 3, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO:0006315 [list] [network] homing of group II introns	(3 genes)	IEA
GO:0090615 [list] [network] mitochondrial mRNA processing	(3 genes)	IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(1058 genes)

IEA

GO MF

GO:0003964 [list] [network] RNA-directed DNA polymerase activity

(3 genes)

IEA

Protein

XP_025981807.2 [sequence] [blastp]
XP_040866605.1 [sequence] [blastp]
XP_040866606.1 [sequence] [blastp]
XP_040866607.1 [sequence] [blastp]
XP_040866608.1 [sequence] [blastp]
XP_040866609.1 [sequence] [blastp]
XP_040866610.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, cyto 3, nucl 2, mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_025981807.2)
chlo 4, cyto 3, nucl 2, mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_040866605.1)
chlo 4, cyto 3, nucl 2, mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_040866606.1)
chlo 4, cyto 3, nucl 2, mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_040866607.1)
chlo 4, cyto 3, nucl 2, mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_040866608.1)
chlo 4, cyto 3, nucl 2, mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_040866609.1)
chlo 4, cyto 3, nucl 2, mito 1, cyto_mito 1, cysk_nucl 1, nucl_plas 1	(predict for XP_040866610.1)

Subcellular
localization
TargetP

mito 6	(predict for XP_025981807.2)
mito 6	(predict for XP_040866605.1)
mito 6	(predict for XP_040866606.1)
mito 6	(predict for XP_040866607.1)
mito 6	(predict for XP_040866608.1)
mito 6	(predict for XP_040866609.1)
mito 6	(predict for XP_040866610.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 112999758	gma-r.7 for 112999758	gma-u.5 for 100812449	mtr-u.5 for 112422855	mtr-u.5 for 112421304	ppo-u.5 for 112327903	ath-u.5 for AT5G04050	bra-r.6 for 103847334	vvi-u.5 for 100264128	ghi-r.1 for 107892540	ghi-r.1 for 107889395	bna-r.1 for 106372667	bna-r.1 for 106372516	cit-r.1 for 102607317	sly-u.5 for 101246113	sot-r.1 for 102587557	nta-r.1 for 107800159	nta-r.1 for 107766291	zma-u.5 for 103629684	tae-r.2 for 123168959	tae-r.2 for 123159924	hvu-r.1 for 123449772	hvu-r.1 for 123412494	sbi-r.1 for 8069370	bdi-r.1 for 100827431

Ortholog

Ortholog ID: 10271

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

zma

tae

hvu

sbi

bdi

Symbol

Function^*