ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11405314	chlorophyll a-b binding protein 13, chloroplastic
mtr-r.5	11405314	chlorophyll a-b binding protein 13, chloroplastic
mtr-m.5	11405314	chlorophyll a-b binding protein 13, chloroplastic
gma-u.5	100779387	chlorophyll a-b binding protein 13, chloroplastic-like
gma-u.5	100790960	chlorophyll a-b binding protein 13, chloroplastic-like
ppo-u.5	18095653	chlorophyll a-b binding protein 13, chloroplastic
ath-u.5	LHCB3	light-harvesting chlorophyll B-binding protein 3
bra-r.6	103844887	chlorophyll a-b binding protein 3, chloroplastic
vvi-u.5	100260599	chlorophyll a-b binding protein 13, chloroplastic
ghi-r.1	107903531	chlorophyll a-b binding protein 13, chloroplastic
ghi-r.1	107948618	chlorophyll a-b binding protein 13, chloroplastic
ghi-r.1	107917723	chlorophyll a-b binding protein 13, chloroplastic
bna-r.1	106380936	chlorophyll a-b binding protein 3, chloroplastic
bna-r.1	111198551	chlorophyll a-b binding protein 3, chloroplastic
bna-r.1	106434505	chlorophyll a-b binding protein 3, chloroplastic
cit-r.1	102625194	chlorophyll a-b binding protein 13, chloroplastic
sly-u.5	101268123	chlorophyll a-b binding protein 13, chloroplastic-like
sly-u.5	CAB13	chlorophyll a-b binding protein 13, chloroplastic
sot-r.1	102586284	chlorophyll a-b binding protein 13, chloroplastic
sot-r.1	102584787	chlorophyll a-b binding protein 13, chloroplastic
nta-r.1	107830195	chlorophyll a-b binding protein 13, chloroplastic
nta-r.1	107793205	chlorophyll a-b binding protein 13, chloroplastic
nta-r.1	107765079	chlorophyll a-b binding protein 13, chloroplastic-like
osa-u.5	4343604	chlorophyll a-b binding protein of LHCII type III, chloroplastic
zma-u.5	100284154	chlorophyll a-b binding protein of LHCII type III
tae-r.2	123188262	chlorophyll a-b binding protein of LHCII type III, chloroplastic
tae-r.2	123183260	chlorophyll a-b binding protein of LHCII type III, chloroplastic
tae-r.2	123148365	chlorophyll a-b binding protein of LHCII type III, chloroplastic
hvu-r.1	123425700	chlorophyll a-b binding protein of LHCII type III, chloroplastic
sbi-r.1	8081748	chlorophyll a-b binding protein of LHCII type III, chloroplastic
bdi-r.1	100836842	chlorophyll a-b binding protein of LHCII type III, chloroplastic

Top 50 coexpressed genes to 11405314 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11405314 (mtr-u.5 coexpression data)

CoexMap"11405314"

[Cytoscape]

Annotation

functional annotation

KEGG

mtr00196 [list] [network] Photosynthesis - antenna proteins (21 genes)

GO BP

GO:0009765 [list] [network] photosynthesis, light harvesting

(26 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3455 genes)

IEA

GO MF

Protein

XP_003596490.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 10

(predict for XP_003596490.1)

Subcellular
localization
TargetP

chlo 4

(predict for XP_003596490.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11405314	mtr-r.5 for 11405314	mtr-m.5 for 11405314	gma-u.5 for 100779387	gma-u.5 for 100790960	ppo-u.5 for 18095653	ath-u.5 for LHCB3	bra-r.6 for 103844887	vvi-u.5 for 100260599	ghi-r.1 for 107903531	ghi-r.1 for 107948618	ghi-r.1 for 107917723	bna-r.1 for 106380936	bna-r.1 for 111198551	bna-r.1 for 106434505	cit-r.1 for 102625194	sly-u.5 for 101268123	sly-u.5 for CAB13	sot-r.1 for 102586284	sot-r.1 for 102584787	nta-r.1 for 107830195	nta-r.1 for 107793205	nta-r.1 for 107765079	osa-u.5 for 4343604	zma-u.5 for 100284154	tae-r.2 for 123188262	tae-r.2 for 123183260	tae-r.2 for 123148365	hvu-r.1 for 123425700	sbi-r.1 for 8081748	bdi-r.1 for 100836842

Ortholog

Ortholog ID: 6998

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LHCB3

CAB13

Function^*