Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11407970   RNA-dependent RNA polymerase 2 
 mtr-r.5   11407970   RNA-dependent RNA polymerase 2 
 mtr-m.5   11407970   RNA-dependent RNA polymerase 2 
 gma-u.5   100808274   RNA-dependent RNA polymerase 2 
 gma-u.5   100789458   RNA-dependent RNA polymerase 2 
 ppo-u.5   7457721   RNA-dependent RNA polymerase 2 
 ath-u.5   RDR2   RNA-dependent RNA polymerase 2 
 vvi-u.5   100260325   RNA-dependent RNA polymerase 2 
 sly-u.5   101250389   RNA-dependent RNA polymerase 2 
 osa-u.5   4336092   probable RNA-dependent RNA polymerase 2 
 zma-u.5   100502460   RNA-dependent DNA polymerase 

close


Top 50 coexpressed genes to 11407970 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11407970 (mtr-u.5 coexpression data)

CoexMap"11407970"


mtrLOC11407970 | Entrez gene ID : 11407970      
Species mtr gma ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030422 [list] [network] siRNA processing  (21 genes)  IEA  
GO CC
GO:0031380 [list] [network] nuclear RNA-directed RNA polymerase complex  (8 genes)  IEA  
GO MF
GO:0003968 [list] [network] RNA-directed RNA polymerase activity  (8 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_013457822.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_013457822.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013457822.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11407970

.
mtr-r.5
for
11407970

.
mtr-m.5
for
11407970

.
gma-u.5
for
100808274

.
gma-u.5
for
100789458

.
ppo-u.5
for
7457721

.
ath-u.5
for
RDR2

.
vvi-u.5
for
100260325

.
sly-u.5
for
101250389

.
osa-u.5
for
4336092

.
zma-u.5
for
100502460

.


Ortholog ID: 8075
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol RDR2 LOC100808274 LOC100789458 LOC101250389 LOC4336092 LOC100502460 LOC103833901 LOC100260325 LOC7457721 LOC11407970 LOC123053573 LOC123053576 LOC123426951 LOC107939800 LOC107939293 LOC106422376 LOC106439671 LOC8073554 LOC102590975 LOC102611197 LOC100821561 LOC100830376 LOC107814202 LOC107773126
Function* RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 RNA-dependent DNA polymerase RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 probable RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2 RNA-dependent RNA polymerase 2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot04141 Protein processing in endoplasmic reticulum 2
sot04146 Peroxisome 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826714 100808274 100789458 101250389 4336092 100502460 103833901 100260325 7457721 11407970 123053573 123053576 123426951 107939800 107939293 106422376 106439671 8073554 102590975 102611197 100821561 100830376 107814202 107773126
The preparation time of this page was 0.1 [sec].