ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11408935	ubiquitin carboxyl-terminal hydrolase 5
mtr-r.5	11408935	ubiquitin carboxyl-terminal hydrolase 5
mtr-m.5	11408935	ubiquitin carboxyl-terminal hydrolase 5
gma-u.5	100794067	ubiquitin carboxyl-terminal hydrolase 5
gma-u.5	100785944	ubiquitin carboxyl-terminal hydrolase 5
ppo-u.5	18106097	ubiquitin carboxyl-terminal hydrolase 5
ppo-u.5	7479647	ubiquitin carboxyl-terminal hydrolase 5
ath-u.5	UBP5	ubiquitin-specific protease 5
vvi-u.5	100258589	ubiquitin carboxyl-terminal hydrolase 5
sly-u.5	101246751	ubiquitin carboxyl-terminal hydrolase 5
osa-u.5	4350498	ubiquitin carboxyl-terminal hydrolase 5
zma-u.5	103646933	ubiquitin carboxyl-terminal hydrolase 5

functional annotation

KEGG

GO BP

GO:0016579 [list] [network] protein deubiquitination

(75 genes)

IEA

GO CC

GO MF

GO:0004843 [list] [network] cysteine-type deubiquitinase activity

(60 genes)

IEA

Protein

XP_003624893.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 1, cyto 1, plas 1, vacu 1, golg 1, chlo_mito 1, golg_plas 1, cyto_pero 1, cyto_E.R. 1

(predict for XP_003624893.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003624893.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11408935	mtr-r.5 for 11408935	mtr-m.5 for 11408935	gma-u.5 for 100794067	gma-u.5 for 100785944	ppo-u.5 for 18106097	ppo-u.5 for 7479647	ath-u.5 for UBP5	vvi-u.5 for 100258589	sly-u.5 for 101246751	osa-u.5 for 4350498	zma-u.5 for 103646933

Ortholog ID: 10038

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

UBP5

Function^*

ubiquitin carboxyl-terminal hydrolase 5

ubiquitin-specific protease 5

ubiquitin carboxyl-terminal hydrolase 5

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo00510	N-Glycan biosynthesis	2
ppo00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	4
ppo03013	Nucleocytoplasmic transport	4
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	5
bra03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	4
vvi03040	Spliceosome	3
vvi04141	Protein processing in endoplasmic reticulum	2
vvi00020	Citrate cycle (TCA cycle)	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi00310	Lysine degradation	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi00310	Lysine degradation	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03420	Nucleotide excision repair	6
bna04141	Protein processing in endoplasmic reticulum	6
bna03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	4
bna03420	Nucleotide excision repair	3
bna04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	3
cit03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae03020	RNA polymerase	2
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3
sbi04120	Ubiquitin mediated proteolysis	2
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3

Expression

Expression pattern

Entrez Gene ID^*

11408935

100785944

100794067

7479647

18106097

818691

103865851

100258589

107896246

107915743

106391628

106431119

102626903

101246751

102596857

107778421

107824117

4350498

103646933

123085853

123091839

123448461

8064420

100823399

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11408935 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11408935 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11408935 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11408935 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**