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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11413262   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 mtr-r.5   11413262   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 mtr-m.5   11413262   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 gma-u.5   100807480   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 ppo-u.5   7492927   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 ath-u.5   PnsL2   PsbQ-like 2 
 vvi-u.5   100243071   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 sly-u.5   101245163   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 osa-u.5   4329766   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 zma-u.5   103653672   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 zma-u.5   103627333   photosynthetic NDH subunit of lumenal location 2, chloroplastic 

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Top 50 coexpressed genes to 11413262 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11413262 (mtr-u.5 coexpression data)

CoexMap"11413262"


mtrLOC11413262 | Entrez gene ID : 11413262      
Species mtr gma ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00195 [list] [network] Photosynthesis (100 genes)
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (23 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (108 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (20 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (23 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (37 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (642 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (278 genes)  IEA  
Protein XP_003613863.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  cyto_mito 1,  mito_plas 1  (predict for XP_003613863.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003613863.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11413262

.
mtr-r.5
for
11413262

.
mtr-m.5
for
11413262

.
gma-u.5
for
100807480

.
ppo-u.5
for
7492927

.
ath-u.5
for
PnsL2

.
vvi-u.5
for
100243071

.
sly-u.5
for
101245163

.
osa-u.5
for
4329766

.
zma-u.5
for
103653672

.
zma-u.5
for
103627333

.


Ortholog ID: 8696
Species ath gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PnsL2 LOC100807480 LOC101245163 LOC4329766 LOC103653672 LOC103627333 LOC103872111 LOC103842995 LOC100243071 LOC7492927 LOC11413262 LOC123130629 LOC123095860 LOC123402625 LOC107893679 LOC107918812 LOC125587478 LOC106380909 LOC8070551 LOC102579009 LOC102608346 LOC100839323 LOC107773657 LOC107831039
Function* PsbQ-like 2 photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic-like photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00195 Photosynthesis 4
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma01200 Carbon metabolism 3
zma00196 Photosynthesis - antenna proteins 2
zma00710 Carbon fixation by Calvin cycle 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00710 Carbon fixation by Calvin cycle 3
bra00910 Nitrogen metabolism 2
bra00195 Photosynthesis 2
bra00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00260 Glycine, serine and threonine metabolism 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 3
mtr01200 Carbon metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00030 Pentose phosphate pathway 2
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 9
tae00710 Carbon fixation by Calvin cycle 9
tae01200 Carbon metabolism 9
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 12
tae00710 Carbon fixation by Calvin cycle 12
tae01200 Carbon metabolism 12
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00195 Photosynthesis 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00710 Carbon fixation by Calvin cycle 6
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00195 Photosynthesis 4
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00710 Carbon fixation by Calvin cycle 6
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00195 Photosynthesis 4
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
bna00260 Glycine, serine and threonine metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00670 One carbon pool by folate 2
bna00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
bna00260 Glycine, serine and threonine metabolism 3
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00670 One carbon pool by folate 3
bna00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 6
sot01200 Carbon metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 3
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi01200 Carbon metabolism 4
bdi00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837974 100807480 101245163 4329766 103653672 103627333 103872111 103842995 100243071 7492927 11413262 123130629 123095860 123402625 107893679 107918812 125587478 106380909 8070551 102579009 102608346 100839323 107773657 107831039
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