ATTED-II : GeneCoexpression result

Species	Gene	Description
mtr-u.5	11420708	uncharacterized LOC11420708
mtr-r.5	11420708	uncharacterized LOC11420708
mtr-m.5	11420708	uncharacterized LOC11420708
gma-u.5	102668468	uncharacterized LOC102668468
gma-u.5	106794208	uncharacterized LOC106794208
ppo-u.5	18108015	uncharacterized LOC18108015
ppo-u.5	112325363	uncharacterized LOC112325363
ath-u.5	AT5G09840	Putative endonuclease or glycosyl hydrolase
ath-u.5	AT5G64710	Putative endonuclease or glycosyl hydrolase
vvi-u.5	100259153	uncharacterized LOC100259153
sly-u.5	101261569	uncharacterized LOC101261569
osa-u.5	4349873	probable GPI-anchored adhesin-like protein PGA55
osa-u.5	4351578	uncharacterized LOC4351578
zma-u.5	100273919	uncharacterized LOC100273919
zma-u.5	103654637	Putative endonuclease or glycosyl hydrolase

Annotation

functional annotation

KEGG

GO BP

GO:0010468 [list] [network] regulation of gene expression

(1961 genes)

IEA

GO CC

GO:0005777 [list] [network] peroxisome

(94 genes)

IEA

GO MF

GO:0004540 [list] [network] RNA nuclease activity

(462 genes)

IEA

Protein

XP_003602534.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, nucl 5

(predict for XP_003602534.1)

Subcellular
localization
TargetP

mito 2

(predict for XP_003602534.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11420708	mtr-r.5 for 11420708	mtr-m.5 for 11420708	gma-u.5 for 102668468	gma-u.5 for 106794208	ppo-u.5 for 18108015	ppo-u.5 for 112325363	ath-u.5 for AT5G09840	ath-u.5 for AT5G64710	vvi-u.5 for 100259153	sly-u.5 for 101261569	osa-u.5 for 4349873	osa-u.5 for 4351578	zma-u.5 for 100273919	zma-u.5 for 103654637

Ortholog

Ortholog ID: 4608

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC11420708

uncharacterized LOC102661134

uncharacterized LOC102660946

uncharacterized LOC18108015

uncharacterized LOC112325363

Putative endonuclease or glycosyl hydrolase

uncharacterized LOC103855253

uncharacterized LOC103846858

uncharacterized LOC100259153

uncharacterized LOC107911485

uncharacterized LOC107956597

uncharacterized LOC106426705

uncharacterized LOC125588839

uncharacterized LOC102616418

uncharacterized LOC101261569

uncharacterized LOC102596006

uncharacterized LOC107776551

uncharacterized LOC107807451

uncharacterized LOC4351578

probable GPI-anchored adhesin-like protein PGA55

Putative endonuclease or glycosyl hydrolase

uncharacterized LOC100273919

uncharacterized LOC123086594

uncharacterized LOC123096415

uncharacterized LOC123409964

uncharacterized LOC123447989

uncharacterized LOC8073605

uncharacterized LOC8079858

uncharacterized LOC104585057

uncharacterized LOC100834665

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	3
mtr03018	RNA degradation	2
mtr03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2
bna00190	Oxidative phosphorylation	2
bna00860	Porphyrin metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	4
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	4
nta00190	Oxidative phosphorylation	2
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta00190	Oxidative phosphorylation	2
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2
zma03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	2
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	3
hvu03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03013	Nucleocytoplasmic transport	2
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	3

Expression

Expression pattern

Entrez Gene ID^*

11420708

102661134

102660946

18108015

112325363

830844

836592

103855253

103846858

100259153

107911485

107956597

106426705

125588839

102616418

101261569

102596006

107776551

107807451

4351578

4349873

103654637

100273919

123086594

123096415

123409964

123447989

8073605

8079858

104585057

100834665

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 11420708 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11420708 (mtr-u.5 coexpression data)


Species	mtr	gma	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	2	2	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11420708 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11420708 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**