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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TPS04   terpene synthase 04 
 bra-r.6   103849658   (E,E)-geranyllinalool synthase 
 bra-r.6   103838542   (E,E)-geranyllinalool synthase 
 ghi-r.1   107914127   (E,E)-geranyllinalool synthase 
 ghi-r.1   107905893   (E,E)-geranyllinalool synthase 
 ghi-r.1   107914460   (E,E)-geranyllinalool synthase 
 cit-r.1   102615273   (E,E)-geranyllinalool synthase 
 sly-u.5   101262489   (E,E)-geranyllinalool synthase 
 sot-r.1   102599238   (E,E)-geranyllinalool synthase 
 nta-r.1   107812701   (E,E)-geranyllinalool synthase-like 
 nta-r.1   107814700   (E,E)-geranyllinalool synthase-like 

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Top 50 coexpressed genes to TPS04 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TPS04 (ath-u.5 coexpression data)

CoexMap"11421616"


mtrLOC11421616 | Entrez gene ID : 11421616      
Species ath bra ghi cit sly sot nta gma zma cre ppo sbi tae mtr osa hvu bna vvi bdi
Paralog 1 2 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016102 [list] [network] diterpenoid biosynthetic process  (44 genes)  IEA  
GO CC
GO MF
GO:0010333 [list] [network] terpene synthase activity  (65 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (164 genes)  IEA  
Protein XP_003593502.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_003593502.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_003593502.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
TPS04
bra-r.6
for
103849658
bra-r.6
for
103838542
ghi-r.1
for
107914127
ghi-r.1
for
107905893
ghi-r.1
for
107914460
cit-r.1
for
102615273
sly-u.5
for
101262489
sot-r.1
for
102599238
nta-r.1
for
107812701
nta-r.1
for
107814700


Ortholog ID: 12498
Species ath bra bra ghi ghi ghi cit sly sot nta nta
Symbol TPS04 LOC103849658 LOC103838542 LOC107914127 LOC107905893 LOC107914460 LOC102615273 LOC101262489 LOC102599238 LOC107812701 LOC107814700
Function* terpene synthase 04 (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase-like (E,E)-geranyllinalool synthase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
ath00904 Diterpenoid biosynthesis 2
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 5
ghi04075 Plant hormone signal transduction 2
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842405 103849658 103838542 107914127 107905893 107914460 102615273 101262489 102599238 107812701 107814700
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