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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11422779   mediator of RNA polymerase II transcription subunit 32 
 mtr-r.5   11422779   mediator of RNA polymerase II transcription subunit 32 
 mtr-m.5   11422779   mediator of RNA polymerase II transcription subunit 32 
 gma-u.5   100306169   uncharacterized LOC100306169 
 gma-u.5   100807018   mediator of RNA polymerase II transcription subunit 32 
 ppo-u.5   7461207   mediator of RNA polymerase II transcription subunit 32 
 ath-u.5   MED32   mediator of RNA polymerase II transcription subunit-like protein 
 vvi-u.5   100852787   mediator of RNA polymerase II transcription subunit 32 
 sly-u.5   101266249   mediator of RNA polymerase II transcription subunit 32 
 osa-u.5   4349300   mediator of RNA polymerase II transcription subunit 32 
 zma-u.5   100276074   Mediator of RNA polymerase II transcription subunit 32 

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Top 50 coexpressed genes to 11422779 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11422779 (mtr-u.5 coexpression data)

CoexMap"11422779"


mtrLOC11422779 | Entrez gene ID : 11422779      
Species mtr gma ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010150 [list] [network] leaf senescence  (3 genes)  IEA  
GO:0009631 [list] [network] cold acclimation  (7 genes)  IEA  
GO:0048364 [list] [network] root development  (48 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1635 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (47 genes)  IEA  
GO MF
Protein XP_003603888.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cyto 1,  mito 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_003603888.1)
Subcellular
localization
TargetP
scret 7,  other 4  (predict for XP_003603888.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11422779

.
mtr-r.5
for
11422779

.
mtr-m.5
for
11422779

.
gma-u.5
for
100306169

.
gma-u.5
for
100807018

.
ppo-u.5
for
7461207

.
ath-u.5
for
MED32

.
vvi-u.5
for
100852787

.
sly-u.5
for
101266249

.
osa-u.5
for
4349300

.
zma-u.5
for
100276074

.


Ortholog ID: 10447
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol MED32 LOC100807018 LOC100306169 LOC101266249 LOC4349300 LOC100276074 LOC103836211 LOC100852787 LOC7461207 LOC11422779 LOC123166997 LOC123043761 LOC123428545 LOC107947394 LOC107886984 LOC106415403 LOC106362169 LOC8055737 LOC102602543 LOC102615540 LOC100842454 LOC107761171 LOC107776313
Function* mediator of RNA polymerase II transcription subunit-like protein mediator of RNA polymerase II transcription subunit 32 uncharacterized LOC100306169 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 Mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32 mediator of RNA polymerase II transcription subunit 32-like mediator of RNA polymerase II transcription subunit 32
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03040 Spliceosome 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03050 Proteasome 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
bna03013 Nucleocytoplasmic transport 5
bna03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03083 Polycomb repressive complex 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837720 100807018 100306169 101266249 4349300 100276074 103836211 100852787 7461207 11422779 123166997 123043761 123428545 107947394 107886984 106415403 106362169 8055737 102602543 102615540 100842454 107761171 107776313
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