ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
mtr-u.5	11423428	protein SPIRAL1-like 2
mtr-r.5	11423428	protein SPIRAL1-like 2
mtr-m.5	11423428	protein SPIRAL1-like 2
mtr-u.5	25495360	protein SPIRAL1-like 2
gma-u.5	100801246	protein SPIRAL1-like 5
gma-u.5	100526947	uncharacterized LOC100526947
gma-u.5	100305520	uncharacterized LOC100305520
ppo-u.5	18105758	protein SPIRAL1-like 1
ppo-u.5	7471066	protein SPIRAL1-like 1
ppo-u.5	7497799	protein SPIRAL1-like 5
ath-u.5	SPR1	spiral1
ath-u.5	SP1L3	SPIRAL1-like3
bra-r.6	103875393	protein SPIRAL1
bra-r.6	103861111	protein SPIRAL1-like 5
bra-r.6	103858946	protein SPIRAL1-like 3
vvi-u.5	100250191	protein SPIRAL1-like 5
vvi-u.5	100265524	protein SPIRAL1-like 1
vvi-u.5	100257592	protein SPIRAL1-like 1
ghi-r.1	107949777	protein SPIRAL1-like 3
ghi-r.1	107910145	protein SPIRAL1-like 1
ghi-r.1	107947661	protein SPIRAL1-like 5
bna-r.1	106427005	protein SPIRAL1-like
cit-r.1	102622507	protein SPIRAL1-like 5
cit-r.1	102631244	protein SPIRAL1-like 3
sly-u.5	101256145	protein SPIRAL1-like 1
sly-u.5	101265332	protein SPIRAL1-like 1
sly-u.5	101257849	protein SPIRAL1-like 1
sot-r.1	102579021	protein SPIRAL1-like 1
sot-r.1	102592684	protein SPIRAL1-like 1
nta-r.1	107781596	protein SPIRAL1-like 3
nta-r.1	107773311	protein SPIRAL1-like 1
nta-r.1	107776489	protein SPIRAL1-like 1
osa-u.5	4352277	protein SPIRAL1-like 3
osa-u.5	9269934	protein SPIRAL1-like 1
zma-u.5	100283729	uncharacterized LOC100283729
zma-u.5	100193571	uncharacterized LOC100193571
zma-u.5	100283951	nitrilase-associated protein
tae-r.2	123188011	protein SPIRAL1-like 1
tae-r.2	123185810	protein SPIRAL1-like 4
hvu-r.1	123425395	protein SPIRAL1-like 1
sbi-r.1	8060427	protein SPIRAL1-like 4
sbi-r.1	8066292	protein SPIRAL1-like 1
sbi-r.1	110429690	protein SPIRAL1-like 3
bdi-r.1	100836722	protein SPIRAL1-like 4
bdi-r.1	100846685	protein SPIRAL1-like 1
cre-r.1	CHLRE_09g394065v5	uncharacterized protein
cre-r.1	CHLRE_11g467576v5	uncharacterized protein

Top 50 coexpressed genes to 11423428 (mtr-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 11423428 (mtr-u.5 coexpression data)

CoexMap"11423428"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0043622 [list] [network] cortical microtubule organization

(10 genes)

IEA

GO CC

GO:0010005 [list] [network] cortical microtubule, transverse to long axis

(3 genes)

IEA

GO MF

Protein

XP_024638913.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 3, mito 2, cysk_nucl 2, nucl_plas 2

(predict for XP_024638913.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_024638913.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	mtr-u.5 for 11423428	mtr-r.5 for 11423428	mtr-m.5 for 11423428	mtr-u.5 for 25495360	gma-u.5 for 100801246	gma-u.5 for 100526947	gma-u.5 for 100305520	ppo-u.5 for 18105758	ppo-u.5 for 7471066	ppo-u.5 for 7497799	ath-u.5 for SPR1	ath-u.5 for SP1L3	bra-r.6 for 103875393	bra-r.6 for 103861111	bra-r.6 for 103858946	vvi-u.5 for 100250191	vvi-u.5 for 100265524	vvi-u.5 for 100257592	ghi-r.1 for 107949777	ghi-r.1 for 107910145	ghi-r.1 for 107947661	bna-r.1 for 106427005	cit-r.1 for 102622507	cit-r.1 for 102631244	sly-u.5 for 101256145	sly-u.5 for 101265332	sly-u.5 for 101257849	sot-r.1 for 102579021	sot-r.1 for 102592684	nta-r.1 for 107781596	nta-r.1 for 107773311	nta-r.1 for 107776489	osa-u.5 for 4352277	osa-u.5 for 9269934	zma-u.5 for 100283729	zma-u.5 for 100193571	zma-u.5 for 100283951	tae-r.2 for 123188011	tae-r.2 for 123185810	hvu-r.1 for 123425395	sbi-r.1 for 8060427	sbi-r.1 for 8066292	sbi-r.1 for 110429690	bdi-r.1 for 100836722	bdi-r.1 for 100846685	cre-r.1 for CHLRE_09g394065v5	cre-r.1 for CHLRE_11g467576v5

Ortholog

Ortholog ID: 648

Species

mtr

gma

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

SPR1

SP1L3

Function^*

protein SPIRAL1-like 2

uncharacterized LOC100526947

uncharacterized LOC100305520

uncharacterized LOC100500021

protein SPIRAL1-like 1

protein SPIRAL1-like 5

spiral1

SPIRAL1-like3

protein SPIRAL1

protein SPIRAL1-like 3

protein SPIRAL1-like 1

protein SPIRAL1-like 5

protein SPIRAL1

protein SPIRAL1-like 5

protein SPIRAL1-like 3

protein SPIRAL1-like 1

protein SPIRAL1-like 5

protein SPIRAL1-like 1

protein SPIRAL1-like 5

protein SPIRAL1-like 1

protein SPIRAL1-like 3

protein SPIRAL1-like 5

protein SPIRAL1-like 3

protein SPIRAL1-like 1

uncharacterized LOC100193571

nitrilase-associated protein

uncharacterized LOC100281623

protein SPIRAL1-like 1

protein SPIRAL1-like 4

protein SPIRAL1-like 1

protein SPIRAL1-like 4

protein SPIRAL1-like 1

protein SPIRAL1-like 2

protein SPIRAL1-like 4

protein SPIRAL1-like 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04517	IgSF CAM signaling	2
mtr00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	7
gma04016	MAPK signaling pathway - plant	3
gma04070	Phosphatidylinositol signaling system	3
gma04075	Plant hormone signal transduction	3
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	3
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00510	N-Glycan biosynthesis	4
ath00513	Various types of N-glycan biosynthesis	4
ath04141	Protein processing in endoplasmic reticulum	4
ath00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00230	Purine metabolism	2
bra01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00510	N-Glycan biosynthesis	2
bra00513	Various types of N-glycan biosynthesis	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	4
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	3
vvi04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	7
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00460	Cyanoamino acid metabolism	2
cit00500	Starch and sucrose metabolism	2
cit00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	4
cit04141	Protein processing in endoplasmic reticulum	3
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04145	Phagosome	4
sly04517	IgSF CAM signaling	4
sly04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04145	Phagosome	3
sot04517	IgSF CAM signaling	3
sot04814	Motor proteins	3
sot00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04145	Phagosome	5
sot04517	IgSF CAM signaling	5
sot04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	6
sot00941	Flavonoid biosynthesis	4
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04070	Phosphatidylinositol signaling system	8
nta04075	Plant hormone signal transduction	8
nta04626	Plant-pathogen interaction	8
nta04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	4
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	7
osa00020	Citrate cycle (TCA cycle)	3
osa01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae04120	Ubiquitin mediated proteolysis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae00020	Citrate cycle (TCA cycle)	3
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03410	Base excision repair	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae04120	Ubiquitin mediated proteolysis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae03250	Viral life cycle - HIV-1	3
tae03272	Virion - Hepatitis viruses	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	5
hvu04130	SNARE interactions in vesicular transport	3
hvu03083	Polycomb repressive complex	3
hvu04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	4
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00941	Flavonoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	4
bdi03083	Polycomb repressive complex	2
bdi04120	Ubiquitin mediated proteolysis	2
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

11423428

25495360

100526947

100305520

100500021

18105758

7497799

814896

821277

103875393

103858946

100265524

100257592

100252679

107910145

107887418

121220096

106396698

102622507

102631244

102615827

101257849

101258583

101247844

102579021

102587138

102585225

107773311

107799151

107783024

4352277

9269934

100193571

100283951

100281623

123188011

123185810

123052154

123425395

8060427

8066292

8079140

100836722

100846685

5720284

5726947

The preparation time of this page was 0.2 [sec].


Species	mtr	gma	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	2	3	3	3	1	2	3	2	3	2	3	2	1	3	2	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 11423428 (mtr-u.5 coexpression data)

Top 50 enrichment test to 11423428 (mtr-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**