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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11425430   FAD synthetase 1, chloroplastic 
 mtr-r.5   11425430   FAD synthetase 1, chloroplastic 
 mtr-m.5   11425430   FAD synthetase 1, chloroplastic 
 gma-u.5   100808911   FAD synthetase 1, chloroplastic 
 ppo-u.5   7457162   FAD synthetase 2, chloroplastic 
 ath-u.5   AT5G08340   Nucleotidylyl transferase superfamily protein 
 ath-u.5   AT5G23330   Nucleotidylyl transferase superfamily protein 
 vvi-u.5   100254929   FAD synthetase 1, chloroplastic 
 sly-u.5   101268091   nucleotidyl transferase superfamily protein 
 osa-u.5   4334460   FAD synthetase, chloroplastic-like 
 zma-u.5   100284794   riboflavin kinase family protein 

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Top 50 coexpressed genes to 11425430 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11425430 (mtr-u.5 coexpression data)

CoexMap"11425430"


mtrLOC11425430 | Entrez gene ID : 11425430      
Species mtr gma ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00740 [list] [network] Riboflavin metabolism (24 genes)
mtr01240 [list] [network] Biosynthesis of cofactors (272 genes)
GO BP
GO:0006747 [list] [network] FAD biosynthetic process  (2 genes)  IEA  
GO:0009231 [list] [network] riboflavin biosynthetic process  (11 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (642 genes)  IEA  
GO MF
GO:0003919 [list] [network] FMN adenylyltransferase activity  (2 genes)  IEA  
Protein XP_024628388.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for XP_024628388.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_024628388.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11425430

.
mtr-r.5
for
11425430

.
mtr-m.5
for
11425430

.
gma-u.5
for
100808911

.
ppo-u.5
for
7457162

.
ath-u.5
for
AT5G08340

.
ath-u.5
for
AT5G23330

.
vvi-u.5
for
100254929

.
sly-u.5
for
101268091

.
osa-u.5
for
4334460

.
zma-u.5
for
100284794

.


Ortholog ID: 9644
Species ath ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G08340 AT5G23330 LOC100808911 LOC101268091 LOC4334460 LOC100284794 LOC103855777 LOC100254929 LOC7457162 LOC11425430 LOC123103602 LOC123111818 LOC123397813 LOC107949010 LOC107898875 LOC106384973 LOC111210462 CHLRE_13g607600v5 LOC8061149 LOC102585096 LOC102621412 LOC100834038 LOC107762451 LOC107777556
Function* Nucleotidylyl transferase superfamily protein Nucleotidylyl transferase superfamily protein FAD synthetase 1, chloroplastic nucleotidyl transferase superfamily protein FAD synthetase, chloroplastic-like riboflavin kinase family protein FAD synthetase 2, chloroplastic FAD synthetase 1, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 1, chloroplastic FAD synthetase, chloroplastic FAD synthetase, chloroplastic FAD synthetase, chloroplastic-like FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic-like uncharacterized protein FAD synthetase, chloroplastic FAD synthetase 1, chloroplastic-like FAD synthetase 2, chloroplastic FAD synthetase, chloroplastic FAD synthetase 2, chloroplastic FAD synthetase 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00740 Riboflavin metabolism 2
sly01240 Biosynthesis of cofactors 2
sly04141 Protein processing in endoplasmic reticulum 2
sly00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00620 Pyruvate metabolism 3
cre01210 2-Oxocarboxylic acid metabolism 2
cre00061 Fatty acid biosynthesis 2
cre00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 3
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 6
nta00030 Pentose phosphate pathway 3
nta00230 Purine metabolism 3
nta01200 Carbon metabolism 3
nta00053 Ascorbate and aldarate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830732 832397 100808911 101268091 4334460 100284794 103855777 100254929 7457162 11425430 123103602 123111818 123397813 107949010 107898875 106384973 111210462 5724704 8061149 102585096 102621412 100834038 107762451 107777556
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